KEGG   Paenibacillus konkukensis: SK3146_06782
Entry
SK3146_06782      CDS       T09860                                 
Name
(GenBank) putative ATP-dependent helicase Lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pkp  Paenibacillus konkukensis
Brite
KEGG Orthology (KO) [BR:pkp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pkp03400]
    SK3146_06782
Enzymes [BR:pkp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SK3146_06782
    5.6.2.6  RNA 3'-5' helicase
     SK3146_06782
DNA repair and recombination proteins [BR:pkp03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SK3146_06782
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD WHD_3rd_Lhr Helicase_C WHD_4th_Lhr ResIII HTH_28 Cas3-like_C_2
Other DBs
NCBI-ProteinID: UQZ87480
UniProt: A0ABY4RYJ2
LinkDB
Position
7740752..7745287
AA seq 1511 aa
MQSTGGIEVFHPLIAGWFTDRFGQPTDVQIRSWRAILSGKHTLIAAPTGSGKTLAGLLPC
LNRILLERESADRGVKLIYITPLKALNNDIHHHVIGYIEELKRRAEALGLGWSGLTSGVR
TGDTPQHARAAMLRNPPDVLVTTPESLYLLLTSPKARMMLKTVRYCIVDEIHDLAADRRG
LHLSVTLERLTEWTGASPQRIGVSATQKPIGLVARFLGGYEPVPAGDRRGSGGEETEATG
RDDHTAESAPEDSGGDGGYAPRDVEIIESRMDKQFRLRVTVPEYTHLTRDKQEAVWGPLT
DHIMKLIEGCRSVLIFVNNRRLCERLTLRLNEHAGREMARSHHGSISREQRLEVEGALKA
GELRCLVATSSLELGIDVGHIDLVVQIDSPKSAAAGIQRIGRAGHSVGDVSRGVIVARTR
GQLPECAALARSIAAREIEDIRIPRGALDVLCQQVVAMVAADDWTLPQLRSTLARSYGYH
GFPPERLEAVLQVLAGYYPFVRPLVDWDRERGLLSRRSSTAMAAIMGAGTIPQGSAYPVH
HAHSHIHLGELDEEYIHESRAGDVFQLGTSSWRIQTIRSDRVYVVEEAGGNSFSEIPFWR
GEGQGRSLAFSEEIGKFMEDLERRMDSEEKQVITGLLMESHHMDARAADELLLLLHAQKA
AAALPTHRRIVIEQFQDDMKQHHLIIHSWFGRTFNRTWQLAIQAYAERRLPYRIYANAKD
NGIEFVVADGGNGDAFKLLPLIREVTSHHLERLLQEAIPGSPQFGITFRRLAETSLLLSR
SFRRMPAWQKRLRSEELLRESLPYAEQFPFIREAIRICMQEELDVHGVRGALRSIETGKL
EVVVAQGAYPSPFAALFLADFINAQMYESDAVGKDLQANLTGLNRSLAGQWFEPSDSITA
SNSDKENADDGALAAVDSEETERVVVETTDDWTRLLKERGEFTEEELTIITGEGSGAASK
LHELEREGKVRTVRLGVARANDEHGTVYWICADEADTYARLGSDPLAGRFIATRYVDRQA
RFTIGALQRRYGLDERTLGELIRGWEAEGRIEPSSYEEGPEERVWLNRRLLIREARRQAA
SLRQSVETIDPAVYCSRLMELQHVQSYARLSGEEGLKRIIGQLQGLFLPLSQWESSVFPL
RLTDYKKELLDRLCAAGDVLWIGRKQEKEGRVAFFLTESRELYGPFLEQADPLNGGAVEL
DPAGVEGLGEPPSDGSAEDRELMALLGRKGASFLSALSRETGRVPSELTSQLVELAWKGL
VSNDQFAPFRLNGTAKPGKARTAAGKGFQSGLGRWYALSSLKEEANYEPPEAMMAWIKQM
LEMFGLLTKELAGYSPWSWEDLYPQLKQLENWGMLTRGLWVRDVKTMQFSTRERLGILQS
RSWTEGNRPVVLPSTDPSNPFGLLVKWPEKEGIAFARKKGSELVMRGGRWLLWIENNGKR
IYTMEELRGDELEELLRSAAADYLRYSGIRKLVVDKWNGKPVKQSEAADILLKLGAESDR
DSLVIWPSSLR
NT seq 4536 nt   +upstreamnt  +downstreamnt
atgcagagtaccggaggaatagaagtatttcatccgctgatcgccggctggtttacggat
cggttcgggcagccgaccgacgttcaaattcgctcctggagggcgatcttgtccggaaag
catacgctgatcgccgccccgaccgggtccggcaagacgctggcagggctgctgccctgt
ctgaaccggatactgctggaacgagagtcggccgatcgcggagtgaagctgatctatatt
acgccgctcaaagctctcaacaacgatattcatcatcatgtcatcggctacatagaggag
ctgaagcgaagggcggaagcgctcgggctcggctggagcgggctcacctccggcgtacgt
accggagacactccgcagcatgctcgtgccgcgatgctccgaaatccgccggacgtgctt
gtaacgacgccggaatcgttatatttgctgctgacctctcccaaagcgcggatgatgctg
aagacggtccgctattgcatcgtcgatgaaatccatgatttggcggcggaccggcgtgga
ctgcatctgtctgtgacgctggagcgactgaccgaatggacaggggcgtcgccgcagcga
atcggcgtttccgcgacgcagaagccgatcgggctggtggcccggtttttgggcggatac
gaaccggtcccggcaggcgatcggagggggagcggcggcgaagagacggaagcgacggga
agggacgatcatacggcggaaagcgccccggaggattccggaggggatggcgggtatgcc
ccgcgagacgtggagattatcgagagccggatggacaagcagttccgtctgcgcgtcact
gttccggagtatacgcatttgaccagagacaagcaggaggcggtctggggaccgcttacc
gaccatattatgaagctgatcgagggctgccgatccgtcttgattttcgtgaacaaccgc
aggctgtgcgagcggctgacgctcaggctgaacgagcatgccggccgcgagatggcccgc
tcccatcacggaagcatttcgcgcgagcagcggctggaggtggaaggcgcgctcaaggcc
ggcgagctgcgctgcctggtggccacctcctcgcttgagctcggcatcgacgtggggcat
atcgatctcgtcgtgcagatcgattcgccgaagagcgcggcagcgggcatccagcggatc
ggccgggccggccactccgtcggcgacgtcagccgcggggtaatcgttgcccgcacccgc
gggcagctgccggaatgcgcggcgctggcgcgcagcatcgccgccagagagatcgaggac
atccggattccgcgcggcgcgctggatgtcctgtgccagcaggtcgtcgccatggtggcg
gcggacgactggaccttgcctcagctgcgcagcacgctggcgcgcagctacggataccac
ggcttcccgccggaacggctcgaagccgtgctccaggtgctggccggctactacccgttc
gtccggccgctggtggattgggatcgggagagggggctgctctcccgccgcagttcgacc
gccatggcggcgatcatgggcgcgggcacgattccgcagggcagcgcctatcctgtccat
catgcccacagccatattcatctcggagagctggacgaggaatatattcacgagagccgc
gcgggagacgtattccagctcggaaccagctcctggagaatccagacgattcgaagcgac
cgggtctatgtggtggaggaagcgggcggcaacagcttcagcgaaattccgttctggcgc
ggagaggggcagggcagaagcttggcgttttccgaagagataggaaagttcatggaagat
ttggagcggcggatggattcggaagagaagcaggttattaccggactgctaatggaatcc
catcatatggacgcccgggcggcggacgaattgctgctgctgctccatgcgcaaaaagcc
gccgcggcgctgcctactcatcgccgcatcgttatcgaacagtttcaggacgatatgaag
cagcatcatctgattattcacagctggttcggccgtacctttaaccgtacttggcagctg
gccattcaggcgtatgccgagcgccggctgccgtaccgcatctatgccaacgccaaggac
aacggcatcgaatttgtcgtggccgacggcgggaacggagacgcgttcaagctgctgccg
ctgatccgcgaggttacctcgcatcatctggagcggctgctgcaagaagcgattccgggc
tcgccgcaattcggcatcacgttccggcggctggccgagacatccttgctgttgtcgcga
agcttccggcggatgccggcttggcagaaacggctgcgcagcgaagagctgctgcgggaa
tcgctgccttatgcggagcagtttccttttatccgcgaagcgatccgcatctgcatgcag
gaggagctggacgtacacggagtgcgcggggcgctcagaagcatcgaaaccggcaagctg
gaggttgtcgttgcccaaggggcttatccttcaccgttcgccgcgttattccttgccgat
tttattaatgcgcaaatgtatgaatccgatgcggtcggcaaagaccttcaagcgaacttg
accgggctgaaccgttcactggcgggacaatggttcgagccctcggactctattactgct
tcgaatagcgacaaagaaaatgcggatgacggagccttagcggccgtggactcggaggag
acggagcgggtcgtcgtcgaaacgacggatgactggacccgattgctaaaagaacgcgga
gagtttactgaagaggagctcacgataatcaccggagagggatcgggcgcggcgagcaaa
ctgcatgagctggaacgggaagggaaagtgcgaaccgttcgtttgggggttgcgcgtgcg
aacgacgagcatgggacggtctattggatctgcgccgacgaagccgacacctatgcgcgg
ctgggctccgatccgctggccggccggtttatcgcgacaagatatgtggatcggcaggct
cgcttcacgataggagcgttgcagcggcgctacggactggacgagcgaacgcttggcgag
ctgattcgcggatgggaggcggaaggaaggatcgagccctcttcctatgaagaagggccg
gaggagcgagtgtggctcaaccgccgcctattgattcgggaagcgcgcaggcaggcggcc
tccctccgtcagtccgtggaaacgatagatccggcggtatattgctcgcggctgatggag
ctgcagcatgtgcagtcttatgcgcggctcagcggcgaggaaggactaaagcggatcatc
ggccagcttcagggactattccttcctctatcccaatgggagagctcggtgttcccgctt
cgcctgaccgattacaagaaagagctgctggaccggctctgcgcagccggcgacgtattg
tggatcggacgaaaacaggagaaggagggccgcgtcgcctttttcctcacggagtcccgc
gagctttacggcccgttccttgaacaagccgatcccctgaacggcggcgctgttgagctt
gatcctgccggggttgagggtctaggggagccgccgtccgacggcagcgcggaggaccgg
gagctcatggcgctgctagggcgcaagggtgccagcttcctgtctgcgctaagccgggag
acagggcgggtcccttcggagcttacatcccaattggtggagctggcatggaaaggtttg
gtctcgaacgatcaattcgccccgttcaggctgaacggcacggcgaagccgggcaaagcg
cgaacggccgcaggcaagggattccagtcgggactcggccgctggtatgcgctcagttcg
ttgaaggaagaggcgaattacgaaccgccggaagcgatgatggcttggatcaagcagatg
ttggagatgttcggcttgctcaccaaggagcttgccggatactctccttggtcgtgggaa
gatctttatccccagcttaagcagttggagaactggggaatgctgacccgcggattatgg
gttcgcgatgtgaaaacgatgcagttttccaccagggaaaggctcggcatcttgcagagc
cgttcatggaccgaagggaaccggccggtcgttcttccttcgacggacccgtccaatccg
ttcggacttctcgtcaaatggccggagaaggaaggcatagcttttgccaggaaaaaaggc
agcgaactcgttatgcgcggaggccgttggctgttgtggatcgaaaataacggcaagcgg
atctatacgatggaggaactgcggggcgatgagctcgaggagctgctgcggagcgccgct
gcggattatttgcggtattccggcatccgcaagcttgtcgtcgacaagtggaatggcaag
cctgtcaaacagtcggaggcggccgatattctccttaagctgggggccgagagcgaccgc
gattcgctcgtcatttggccgagcagcctgcggtag

DBGET integrated database retrieval system