Pseudoxanthomonas koreensis: ACEJ41_00555
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Entry
ACEJ41_00555 CDS
T10879
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pkq Pseudoxanthomonas koreensis
Pathway
pkq03030
DNA replication
pkq03410
Base excision repair
pkq03420
Nucleotide excision repair
pkq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACEJ41_00555 (polA)
03410 Base excision repair
ACEJ41_00555 (polA)
03420 Nucleotide excision repair
ACEJ41_00555 (polA)
03440 Homologous recombination
ACEJ41_00555 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkq03032
]
ACEJ41_00555 (polA)
03400 DNA repair and recombination proteins [BR:
pkq03400
]
ACEJ41_00555 (polA)
Enzymes [BR:
pkq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACEJ41_00555 (polA)
DNA replication proteins [BR:
pkq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ACEJ41_00555 (polA)
DNA repair and recombination proteins [BR:
pkq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ACEJ41_00555 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACEJ41_00555 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WD40_4
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
XGI14174
LinkDB
All DBs
Position
121361..124171
Genome browser
AA seq
936 aa
AA seq
DB search
MTRLVLIDGSSYLYRAFHALPPLTNAAGEPTGALFGVVNMLRATLKEKPDYVAFVVDAPG
KTFRDDLYPDYKANRPPMPDELRAQVQPMCEIVHALGIDILRVDGVEADDVIGTLAVQAA
DAGMQVTISTGDKDFAQLVREPGAGGGSIALVNTMSGSRTESDAAVVEKFGVPAARIVDL
LALMGDAIDNVPGVDKCGPKTAAKWLGQYGSLDGVIDNADAIKGKVGDNLRAALARLPLN
RELVTIRTDVPVGRAPDTLRLRDPHVDELRVLYGRYGFNQALKELEAGSLAGDGAGLAAV
AEREPARARGGGFVAAAVTPVAVDPALSVPGRYEAVTTIDQLEAWIATLRRAGSFAFDTE
TDSLDPMRATLVGLSFAAEPGHAAYVPFGHDYPGVPAQLDRTRALELLRPMLEDPGVRKL
GQHGKYDLHVMRRHGVALAGYADDTLLQSFVLEAGSARHDLDSLARRHLGYETLKYEDLC
GKGAKQIPFSQCALDDATRYAAEDADITLRLHRVLAPRLAAEPSLEHVYRQIEMPLVQVL
QRIEANGVKVDMDELRRQSGDLSKRMLAAQQRATELAGRTFNLDSPKQLGALLFEELKLP
ALVKTPKGQPSTNEDALEAIADLHELPRVILEYRGLAKLRGTYTDKLPEMVNPDTGRLHT
SYHQAGAATGRLSSSDPNLQNIPIRTDDGRRIRRAFVAPPGRKLVACDYSQIELRIMAHL
SQDAGLLRAFESGADIHRATAAEVFARPLEEVTGNERRAAKAINFGLMYGMGAFGLARQL
GIGRGQAQDYIALYFSRYPGVRDYMERTREQARERGYVETVSGRRLYLEYINARNQAQRA
GAERAAINAPMQGTAADIIKRAMVAVDAWLGELGGAGGSSPALMILQVHDELVFEAEEAF
VPVLLEEVGRRMVSAAQLSVPLVVDSGVGDNWDEAH
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcctcgtactgatcgacggttccagctacctctaccgcgccttccatgccctg
ccgccgctgaccaacgcggccggcgaaccgaccggggcgctgttcggcgtggtcaacatg
ctgcgcgccaccctgaaggaaaagcccgattacgtggccttcgtggtcgatgcgcccggc
aagaccttccgcgacgacctctatccggactacaaggccaaccgcccgcccatgcccgac
gagctgcgcgcgcaggtgcagcccatgtgcgagatcgtgcacgcgctgggcatcgatatc
ctgcgggtggacggggtagaggccgacgacgtgatcggcaccctggcggtgcaggccgcc
gatgccgggatgcaggtgaccatctccaccggcgacaaggacttcgcccagctggtccgc
gagcctggcgccggtggcgggtccatcgccctggtcaacaccatgagcggcagccgcacc
gaatcggacgcggcggtggtggagaagttcggcgtgccggccgcgcgcatcgtcgacctg
ctggcgttgatgggcgatgccatcgacaacgtgcccggcgtggacaagtgcgggcccaag
accgcggccaagtggctgggccagtacggctcgctggacggggtgatcgacaacgccgac
gcgatcaagggcaaggtgggcgacaacctgcgcgcggcgctggcacgtttgccgctcaac
cgcgagctggtgacgatcaggaccgacgtgccggtggggcgcgcgcccgacaccctgcgc
ctgcgcgacccgcatgtggacgagttgcgcgtgctgtacgggcgctatggcttcaaccag
gcgctgaaggaactggaggccgggtcgctggccggcgacggcgcaggcctggcggcggtt
gccgagcgcgaaccggcgcgcgcgcgcggtggcggcttcgtggcggcggcggtgactccg
gtggcggtcgatccagcgctgtcggtgccgggccggtacgaggccgtgaccaccatcgac
cagctggaagcctggatcgcgaccctgcgccgcgccggcagcttcgccttcgataccgag
accgacagcctggacccgatgcgcgccaccctggtggggctgagtttcgccgccgagccg
ggccacgccgcctacgtgccgttcgggcacgattatcccggcgtgccggcgcagctggac
cgcacccgggcgctggagctgctgcgcccgatgctggaggacccgggcgtgcgcaagctg
ggccagcacggcaagtacgacctgcacgtcatgcgccgccacggcgtggcgctggccggg
tatgccgacgacaccctgctgcagagtttcgtgctggaggcgggcagcgcccgccatgac
ctggacagcctggcccgccgccacctgggctacgagaccctcaagtacgaagacctgtgc
ggcaagggcgccaagcagattcccttctcccagtgcgcgctggacgacgccacccgctac
gccgccgaggacgccgacatcaccctgcgcctgcaccgggtgctggcgccgcggctggcc
gccgagccgtcgctggaacacgtctaccgccagatcgagatgccgctggtgcaggtgttg
cagcggatcgaggccaacggggtgaaggtggacatggacgagctgcgccgccagagcggc
gacctgtccaagcgcatgctcgccgcccagcagcgcgccaccgaactggccgggcgcacg
ttcaacctggattcgcccaagcagctgggggcgctgctgttcgaggagctgaagctgccg
gcgctggtgaagacccccaagggccagcccagcaccaacgaagacgcgctggaggcgatc
gccgacctgcacgagttgccgcgggtgatcctggagtaccgcggcctggccaagctgcgc
ggcacctacaccgacaagctgccggagatggtcaacccggataccggccggctgcacacc
agctaccaccaggccggcgccgccaccgggcgcctgtcctcgtccgatccgaacctgcag
aacatcccgatccgcaccgacgacggccgccgcatccgccgcgccttcgtcgccccgccc
gggcgcaagctggtggcctgcgactattcgcagatcgagctgcggatcatggcccacctg
tcccaggacgccggcctgctgcgcgcgttcgaatccggtgccgacatccatcgcgccacc
gccgccgaggtcttcgcccggccgctggaagaggtcaccggcaacgaacggcgcgcggcc
aaggcgatcaacttcggcctgatgtacggcatgggggcgttcggcctggcccgccagctg
ggcatcggccgtggccaggcgcaggactacatcgccctgtacttcagccgctacccgggc
gtgcgcgactacatggagcgcacccgcgagcaggcgcgtgaacgcggctacgtggaaacg
gtgtccggccggcgcctgtacctggagtacatcaacgcccgcaaccaggcccagcgtgcc
ggtgccgagcgcgcggcgatcaacgcgccgatgcagggcaccgcggcggacatcatcaag
cgcgcgatggtggcggtggacgcgtggctgggggagctgggcggggccggcggcagcagc
ccggcgctgatgatcctgcaggtgcacgacgagctggtgttcgaggccgaggaggccttc
gtgccggtgctgctggaggaggtcgggcggcgcatggtgtcggctgcacaactcagcgtc
ccattggtggtcgacagcggtgtgggtgacaactgggacgaggcgcactga
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