Pseudoxanthomonas koreensis: ACEJ41_05600
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Entry
ACEJ41_05600 CDS
T10879
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pkq Pseudoxanthomonas koreensis
Brite
KEGG Orthology (KO) [BR:
pkq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pkq03016
]
ACEJ41_05600 (truB)
Enzymes [BR:
pkq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACEJ41_05600 (truB)
Transfer RNA biogenesis [BR:
pkq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACEJ41_05600 (truB)
Prokaryotic type
ACEJ41_05600 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
XGI15105
LinkDB
All DBs
Position
1211286..1212224
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AA seq
312 aa
AA seq
DB search
MTTPARIKFRDIDGILLLDKPAGMSSNAALQSARRLFRAAKGGHTGSLDPLATGLLPLCF
GEATKLAGLLLGADKAYEADIMLGATTDTDDADGQVLRRRPVPALERASLEAALGTFTGV
LQQRAPVYSALKQGGEPLYARARRGEVIEAPVREVSVHAFELLDHDASRLRVRVRCGSGT
YIRSLARDLGEVLGCGAHIGTLRRLWVEPFRQPRMWSLEALQALAGSGGEAALDACLLPL
HAGLAGFARVELGADEAARFVLGQRLRGPWPVADPAGVFGPQGVALGLGRVGEGGRLSPQ
RLFRPPGSGQPG
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaccagcgcgcatcaagttccgcgatatcgacggaatcctcctcctggacaag
ccggcgggcatgagctccaacgccgcgctgcagtccgcacggcgcctgttccgcgccgcg
aagggcggccacaccggcagcctggatccattggctaccggcctgctgccgttgtgcttc
ggcgaagccaccaagctggccggcctgctgctcggcgcggacaaggcctacgaggccgac
atcatgctgggcgccaccaccgacaccgacgacgccgacggccaggtgctgcgccggcgc
ccggtgccggccctggagcgggcatcgctcgaggccgcgctgggcacgttcaccggtgtg
ctgcagcagcgcgcgccggtgtactcggcgctcaagcagggcggcgagccgttgtatgcg
cgtgcgcggcgcggtgaggtgatcgaagcgccggtgcgcgaggtgagcgtccacgccttc
gagttgctcgaccacgacgccagccggctgcgcgtgcgggtgcgttgcgggtcgggcacc
tacatccgcagcctggcccgtgacctgggcgaggtgctggggtgcggggcgcacatcggg
acactgcgccgactgtgggtcgagccgttccggcagccgcggatgtggagcctggaggcc
ttgcaggcactggccgggtcgggcggcgaggccgcgctggatgcctgcctgctgcccctg
cacgctggcctggcggggtttgcccgggtcgaactgggcgcggacgaggccgcgcgcttc
gtcctgggccagcgcctgcgcgggccgtggccggtggccgaccctgccggggtgttcggc
ccgcagggcgttgcgctggggctgggccgggtgggcgagggcgggcgcctgtctccgcag
cggcttttccgcccgcccggatccggccaaccaggctga
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