Pseudoxanthomonas koreensis: ACEJ41_07010
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Entry
ACEJ41_07010 CDS
T10879
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pkq Pseudoxanthomonas koreensis
Brite
KEGG Orthology (KO) [BR:
pkq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkq03032
]
ACEJ41_07010
03036 Chromosome and associated proteins [BR:
pkq03036
]
ACEJ41_07010
03400 DNA repair and recombination proteins [BR:
pkq03400
]
ACEJ41_07010
DNA replication proteins [BR:
pkq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ACEJ41_07010
Chromosome and associated proteins [BR:
pkq03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ACEJ41_07010
DNA repair and recombination proteins [BR:
pkq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ACEJ41_07010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
PTS-HPr
Motif
Other DBs
NCBI-ProteinID:
XGI12886
LinkDB
All DBs
Position
complement(1532082..1532396)
Genome browser
AA seq
104 aa
AA seq
DB search
MTKSELIEILARRQSHLKAEDVDLAVKSLLEMMAGSLASGERIEIRGFGSFSLHYRPPRM
GRNPKTGEAVALPGKHVPHFKPGKELREKVSGVMPAPAEPQESP
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtccgaactgatcgagatcctggcacgccgccagtcgcacctgaaggccgag
gacgtggaccttgccgtcaagtcgctgctggagatgatggctggctcgcttgcctccggc
gagcgcatcgagatccgtggattcggcagtttttcgctgcactaccggccgccgcgcatg
ggccgcaaccccaagaccggcgaggcggtggcgttgccgggcaagcacgtgccgcacttc
aagccgggcaaggaactgcgcgagaaggtcagcggggtgatgcccgcgccggccgaaccg
caggaaagcccctga
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