KEGG   Pseudoxanthomonas koreensis: ACEJ41_07905
Entry
ACEJ41_07905      CDS       T10879                                 
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
pkq  Pseudoxanthomonas koreensis
Pathway
pkq03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pkq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    ACEJ41_07905 (sbcB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pkq03400]
    ACEJ41_07905 (sbcB)
Enzymes [BR:pkq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     ACEJ41_07905 (sbcB)
DNA repair and recombination proteins [BR:pkq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     ACEJ41_07905 (sbcB)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     ACEJ41_07905 (sbcB)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      ACEJ41_07905 (sbcB)
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: XGI13056
LinkDB
Position
1730696..1732135
AA seq 479 aa
MADTFLFYDLETFGADPRRSRIAQFAALRTDPELNPVEAPVSLFVQPAQDLLPSPQATLI
TGITPQHALREGVPEAEAAARIVEEMARPGTCTLGYNSLRFDDEFVRHTLFRNFFDPYER
EWRGGNSRWDLLDVLRLAHALRPDGIAWPRREDGATSFKLEHLAIANDVRDGDAHEALSD
VYATVGLARLFKRAQPRLWDYALKLRDKRHAASLLDTFAMQPVLHVSQRYPASRMCAAVV
LPLAAHPSIGNRVIVFDLDGDIDALLEQDAAEIADRLYTPAADLPPGVARVPLKEVHLNR
SPMLVPWAHLRADDFQRLGLEPDALQARAERLRAHGPALAEKARQVFAGNRAPVQGDVDG
ALYAGFCGDGDRRLCTQVRATPATELGTRVFDFRDARLPELLFRYRARNWPDTLAPTERE
RWDDYRRHRLGDDSGLSEYGLSGYFAEIAALRASHAGDGGKQVLLDQLEQWGRDLQDGL
NT seq 1440 nt   +upstreamnt  +downstreamnt
atggccgacaccttcctgttctacgacctggagaccttcggcgccgacccgcgacgcagc
cgcatcgcccagttcgccgcgttgcgcaccgatccggaactgaacccggtggaagcaccg
gtcagcctgttcgtgcagccggcgcaggacctgctgccatctccgcaggccaccctcatt
accggcatcactccacagcatgcgctgcgcgagggcgtgcccgaggccgaggcagcggcg
cgcatcgtcgaggaaatggcccggcccggcacctgcaccctgggctacaactcgctgcgc
ttcgacgacgagttcgtgcgccataccctgttccgcaatttcttcgacccctacgagcgc
gagtggcgcggcggcaactcgcgctgggacctgctggacgtgctgcgcctggcccatgcc
ctgcgcccggacgggatcgcctggccgcggcgcgaggatggcgccacctcgttcaagctc
gaacacctggccatcgccaacgacgtgcgcgatggcgacgcgcacgaagcgctgtcggac
gtgtacgccaccgtcggcctggcccggctgttcaagcgcgcccagccgcggctgtgggat
tacgccctgaagctgcgcgacaagcgccatgccgccagcctgctcgataccttcgccatg
cagccggtgctgcacgtctcccagcgctatccggccagccggatgtgcgcggccgtggtc
ctgccgctggccgcgcatccgtccatcggcaaccgggtgatcgtgttcgacctggacggc
gacattgacgccttgctggagcaggatgcggcggagatcgccgaccggctctacaccccg
gctgcggacctgccaccgggcgtggcccgggtgccgctgaaggaagtgcacctgaaccgt
tcgccgatgctggtgccgtgggcgcacctgcgcgcggatgatttccagcgcctgggcctg
gagccggacgccctgcaggcgcgtgccgaacgcctgcgcgcgcacggcccggcactggcc
gaaaaggcccgccaggtattcgccggcaaccgcgcaccagtccagggtgacgtggatggc
gcgctctacgccggcttctgcggcgacggcgaccgccgcctgtgcacccaggtgcgtgcc
accccggccacggaactgggcacgcgggtgttcgacttccgcgatgcgcgcctgcccgaa
ctgctgttccgctaccgggcccgcaactggccggacacgctcgcgcccaccgagcgcgaa
cgctgggacgactaccgccgccatcgcctcggcgacgacagcggcctgtccgaatacggc
ttgtccggctacttcgccgagatcgccgcgctgcgcgccagccatgccggcgacggcgga
aaacaggtcttgctcgaccagctcgaacagtggggccgcgacctgcaggacgggctatga

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