Pseudoxanthomonas koreensis: ACEJ41_08070
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Entry
ACEJ41_08070 CDS
T10879
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pkq Pseudoxanthomonas koreensis
Brite
KEGG Orthology (KO) [BR:
pkq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pkq03009
]
ACEJ41_08070
Enzymes [BR:
pkq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
ACEJ41_08070
Ribosome biogenesis [BR:
pkq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ACEJ41_08070
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
XGI13087
LinkDB
All DBs
Position
1767264..1768778
Genome browser
AA seq
504 aa
AA seq
DB search
MTDSTPRKPLGKLSLKRDEAASTARPEERLHKVLAQAGLGSRRALEQRIADGLVKVNGEV
ARVGQSIRSGDRVELDGKAFVASALTEPPRMLIYNKPEGEVTTREDPEGRPTIFDALPRL
KGARWIAIGRLDINTSGLLLLTTDGEIANAMMHPSFEVEREYVVRVRAPEGQESVSDSLV
DRLARGVALEDGPAKFDQVERIGGTDSHDWFKVVVKEGRNREVRRLWESQGCQVSRLKRV
RYGGVSLPRELLRGHSQELAPAQVEAERKKLALEDGADSTLTLQPVIGQRRAAKSTVQVG
RDGSRSQAYVNGHNTADEGRELRRFDHVREDRRGGRGGKKPGGLTVTGEAAAQQMQKPFK
QRKQKGPKPLPDGNPAAFRSWYVPDGVSTGPSGHRNAGPGDKPRGGKPGGGRPGGGKPGG
SGKSGGQGAGARKNARPYGHPGSAPHFPSDHATPGGQGAPGRARGPGQGQRPNQGQGPRG
NARPGGRPGGGAPRGGNRGPRGQG
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgactgattccacaccccgcaaacccctcggcaagctctcgctcaagcgcgatgaagcc
gccagcaccgcccgccccgaagaacgcctgcacaaggtcctggcccaggccggcctgggc
tcgcgccgcgcgctggagcagcgcatcgccgatggcctggtcaaggtcaatggcgaagtc
gcccgggtcggccagagcatccgcagcggcgaccgggtcgagctggacggcaaggccttc
gtcgcctcggcgctgaccgagccgccgcgcatgctgatctacaacaagcccgagggcgag
gtgaccacgcgcgaggatccggaaggccgccccaccatcttcgatgcactgccgcggctc
aagggcgcgcgctggatcgccatcggccggctggacatcaacaccagcggcctgctgctg
ctgaccaccgacggcgaaatcgccaacgcgatgatgcatccgtcgttcgaggtcgagcgc
gaatacgtcgtgcgggtgcgtgcgccggaaggccaggagtcggtgagcgacagcctggtc
gaccgcctcgcccgcggggtggcactggaggacgggccggcaaagttcgaccaggtcgag
cgcatcggcggcaccgactcacacgactggttcaaggtggtggtcaaggaaggccgcaac
cgcgaagtgcgccgcctgtgggagtcgcagggctgccaggtcagccggctcaagcgcgtg
cgctacggcggcgtgagcctgccgcgcgaactgctgcgtggccattcgcaggagcttgcg
cccgcgcaggtggaagcggagcgcaagaagctcgcgctggaggatggcgccgattccacc
ctgaccttgcagccggtgatcgggcagcgccgcgcggccaagtccacggtgcaggtcggc
cgcgatggcagccgcagccaggcctacgtcaatggccacaacaccgccgacgaggggcgc
gaactgcgccgcttcgatcatgtgcgcgaggatcgtcgcggcggccgcggtggcaagaag
ccgggcgggctgaccgtcaccggcgaggccgcggcccagcagatgcagaagccgttcaag
cagcgcaagcagaagggtcccaagccgctgccggatggcaacccggccgcattccgatcc
tggtacgtgcccgacggggtaagcaccggccccagcggccatcgcaacgccggaccgggc
gacaagccgcgcggcggcaagcctggcggtggccggcccggcggcggcaagcccggcggc
agtggcaagtccggcggccagggcgcgggtgcacgcaagaacgcgcggccgtacgggcat
ccaggcagcgccccgcacttcccgtccgaccatgccactccgggtggacagggtgcgccg
ggccgcgcccgtggcccgggccagggtcaacggccgaaccagggccagggcccgcgcggc
aacgcgcgcccgggcgggcgtcctggcgggggtgcgccacgcggcggcaatcgcggcccg
cgcggccagggctga
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