Pseudoxanthomonas koreensis: ACEJ41_08360
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Entry
ACEJ41_08360 CDS
T10879
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pkq Pseudoxanthomonas koreensis
Pathway
pkq03030
DNA replication
pkq03430
Mismatch repair
pkq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACEJ41_08360 (dnaX)
03430 Mismatch repair
ACEJ41_08360 (dnaX)
03440 Homologous recombination
ACEJ41_08360 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkq03032
]
ACEJ41_08360 (dnaX)
03400 DNA repair and recombination proteins [BR:
pkq03400
]
ACEJ41_08360 (dnaX)
Enzymes [BR:
pkq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACEJ41_08360 (dnaX)
DNA replication proteins [BR:
pkq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACEJ41_08360 (dnaX)
DNA repair and recombination proteins [BR:
pkq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACEJ41_08360 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
DNA_pol3_tau_5
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_14
AAA_assoc_2
AAA_18
AAA_30
AAA_2
AAA_7
TsaE
AAA_19
nSTAND3
Mg_chelatase
PIF1
AAA_24
Glyco_tranf_2_5
Motif
Other DBs
NCBI-ProteinID:
XGI13140
LinkDB
All DBs
Position
complement(1820354..1822162)
Genome browser
AA seq
602 aa
AA seq
DB search
MSYLVLARKWRPKRFSELVGQEHVVRALGNALDTGRVHHAFLFSGTRGVGKTTIARIFAK
SLNCQKGVSAEPCGECPACTDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPSRGQY
KVYLIDEVHMLSKQAFNALLKTLEEPPGHVKFLLATTDPQRLPITVLSRCLQFNLKRLDE
GQIEGQMTRILAAEQIQADPGAIRQLARAADGSLRDGLSLLDQAIAYAGGALAEDSVRAM
LGSVDRTQVAALLDALADGDGQALLATVDALAGFAPDWGNVLEALAEALHRIQVRQLVPA
VAREDGGLAVDAWAARVRPEVVQLWYQMAVNGRRDLDLAPAPRVGFEMSVLRMLAFRPDA
DAGPPAAGPGAGAGTGGDAAAPGRPTRPVASAVAPAALAASNPPAAAAPVPAPAPRAPAP
ERADPPPWDAAPALQPGIVMQPASVAPESTAAPAAASPAVPATGQAGSAPAAIVVDAEDW
LRRVAACDLNGPARQLAAHTAFVGHADGALTLALEPGFEYLRSERSVAALADAMAASLGS
PPRIVIEAGAAQAPTLHQRQEHERDSRQSAAEQTFLNDPGVRRLIEQHGARVVPDSIRPY
DE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacctcgtcctcgcccgcaaatggcgcccgaagcgtttttccgagctggtcggg
caggaacacgtcgtgcgcgcgctgggcaatgccctggataccggccgggtccaccatgcc
ttcctgttcagcggcacccgcggggtcggcaagaccaccatcgcccggatcttcgccaag
tcgctcaactgccagaagggcgtcagcgccgagccctgcggtgaatgcccggcctgcacc
gacatcgatgccggccgctacatcgacctgctggagatcgacgcggcctccaacaccggc
gtggacgacgtgcgcgaggtcatcgagaacgcgcagtacatgccctcgcgcgggcagtac
aaggtgtacctgatcgacgaggtgcacatgctgtccaagcaggcattcaacgccctgctc
aagaccctggaagaaccgccggggcacgtgaagttcctgctggccaccaccgatccgcag
cggctgccgatcacggtgctgtcgcgctgcctgcagttcaacctcaagcgcctggacgaa
ggccagatcgaaggccagatgaccaggatcctggccgccgagcagatccaggccgacccc
ggcgcgatccgccagctggcgcgcgcggccgatggcagcctgcgtgacggcctgtcgctg
ctggaccaggccatcgcctatgccggtggtgccctggccgaagattcggtgcgggcgatg
ctcggcagcgtggaccggacccaggtggccgcactgctggatgcgctggccgatggtgat
ggccaggcgctgctggccacggtggatgcgctggccggcttcgccccggactggggcaac
gtgctggaggcgctggccgaggcactgcaccggatccaggtgcggcaactggtgcctgct
gtcgcccgcgaggacggtggcctggccgtggatgcctgggccgcgcgggtgcgcccggag
gtggtccagctctggtaccagatggcggtcaacggtcgccgtgacctcgacctggcgcct
gcgccgcgggtgggcttcgagatgagcgtgctgcggatgctggcgttccgtcccgacgcc
gacgccggtccgccggccgcggggccgggcgcaggcgcaggtaccggcggcgatgcggcc
gcgcccggacgcccgacgcggccggtggcgtcggccgtggcacccgccgcgctggcagcg
tccaatccgcccgccgcggccgcgccagtgccggcgccggcgccgcgcgcgcctgcgcct
gagcgggcggatccgccaccgtgggatgcagcccccgcgctgcagcctggcatcgtgatg
cagcccgcctccgttgcgccggagtccaccgccgcgccggctgctgcgtcaccggccgtg
cccgccaccggccaggcggggtccgcgccggctgcgatcgtggtcgatgccgaggactgg
ctgcggcgcgtggccgcctgcgacctcaacgggcccgcccggcaactggccgcgcacacg
gccttcgtcggccacgccgatggtgcgttgaccctggccctggagccgggcttcgagtac
ctgcgcagcgagcgctcggtcgccgcgctggccgatgccatggccgcctcgctggggtcg
ccgccgaggatcgtgatcgaggccggggccgcgcaggcaccgaccctgcaccagcgccag
gaacacgagcgcgactcgcgccagagcgcggccgagcagacctttctcaacgatccgggc
gtcaggcgcctgatcgaacagcacggggcacgcgtggtgcccgattccatccgcccctac
gacgagtga
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