Pseudoxanthomonas koreensis: ACEJ41_08965
Help
Entry
ACEJ41_08965 CDS
T10879
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pkq Pseudoxanthomonas koreensis
Pathway
pkq00300
Lysine biosynthesis
pkq01100
Metabolic pathways
pkq01120
Microbial metabolism in diverse environments
pkq01230
Biosynthesis of amino acids
Module
pkq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pkq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ACEJ41_08965 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pkq01002
]
ACEJ41_08965 (dapE)
Enzymes [BR:
pkq01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
ACEJ41_08965 (dapE)
Peptidases and inhibitors [BR:
pkq01002
]
Metallo peptidases
Family M20
ACEJ41_08965 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
XGI13244
LinkDB
All DBs
Position
complement(1948830..1949984)
Genome browser
AA seq
384 aa
AA seq
DB search
MSEVLDLTCDLIARASVTPDDAGCQALLAARLERAGFTCEHLRYGEVDNLWATHGTADGP
VLLLLGHTDVVPPGPREAWSSDPFIPEVRDGVLYGRGAADMKSGVAALVIAAARFVAAHP
DHPGTLAVLLTSDEEGDAIDGVRRVAETLRQRGQRIDWCITGEPSSTATLGDLLRVGRRG
SLSATLTVHGVQGHVAYPHKARNPIHQAMPALAELAARVWDAGYEDFPPTSLQISNIHAG
TGATNVVPGQLQVLFNLRYNPHWDAPALEAQIAALLDRHGLQYTLHWHRSGEPFYTPEGR
LRQVARQVLGRFAGAAPEESTGGGTSDARFIAPLGAQCIEVGPVNASIHQIDEHVRVDAL
EALPELYLHLIKDLLVPAAVPDGA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagtgctcgacctgacctgcgacctgatcgcacgcgcctccgtcactcccgac
gatgccggttgccaggcgttgctcgccgcgcgcctggagcgtgccggtttcacctgcgag
cacctgcgctatggcgaggtcgacaacctgtgggccacccatggcaccgccgatgggccg
gtgctgctgctgctgggccataccgacgtggtcccgcccgggccgcgcgaggcctggtcc
agcgaccccttcatccccgaggtccgtgacggcgtcctctatggtcgcggtgccgccgac
atgaaatcgggcgtggccgcgctggtgatcgcggccgcgcgtttcgtggccgcgcatccg
gatcatccgggcaccctggccgtgctgctcacctcagacgaggagggcgacgcgatcgac
ggcgtgcgccgggtggccgaaaccctgcgccagcgcggccaacgcatcgactggtgcatc
accggcgagccgtcctccaccgccaccctgggcgacctgctgcgggtcgggcgccgcggc
agcctgtcggcgacgttgacggtgcacggtgtgcagggccatgtggcctatccgcacaag
gcacgcaacccgatccaccaggcgatgccggcgctggccgagctggcggcgcgggtttgg
gacgcaggctatgaggattttccgccgaccagcctgcagatcagcaacatccatgcggga
accggcgccaccaacgtcgtccccggccagctgcaggtgctgttcaacctgcgctacaac
ccgcactgggatgcgcctgcgctggaagcgcagatcgccgcgctgctggaccgccacggg
ctgcagtacacgctgcactggcatcgcagcggcgagccgttctacacccccgagggccgc
ctgcggcaggttgcgcgccaggtgctgggccgctttgccggtgcggcgccggaggaaagt
accggcggcggcacctccgatgcgcgcttcatcgcgccgctgggcgcgcagtgcatcgag
gtggggccggtcaacgccagcatccaccagatcgacgaacacgtgcgcgtggacgcgctg
gaagcgctgcccgagctgtacctgcacctgatcaaggacctgctggtcccggccgccgtt
ccggacggggcctga
DBGET
integrated database retrieval system
