Pseudoxanthomonas koreensis: ACEJ41_10160
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Entry
ACEJ41_10160 CDS
T10879
Name
(GenBank) sigma-54-dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pkq Pseudoxanthomonas koreensis
Pathway
pkq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pkq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACEJ41_10160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pkq02022
]
ACEJ41_10160
02035 Bacterial motility proteins [BR:
pkq02035
]
ACEJ41_10160
Two-component system [BR:
pkq02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
ACEJ41_10160
Bacterial motility proteins [BR:
pkq02035
]
Pilus system
Twitching motility proteins
ACEJ41_10160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
Mg_chelatase
HTH_30
AAA_19
Pre_tape_measure
Motif
Other DBs
NCBI-ProteinID:
XGI13466
LinkDB
All DBs
Position
2220169..2221587
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AA seq
472 aa
AA seq
DB search
MPASPLSSCAMTQSRSALIVDDERDIRELLVLTLGRMGLRVDTAANLSEARELLGRGHYD
LCLTDMRLPDGNGIELVGEIARHHPQTPVAMITAFGNMDLAVEALKAGAFDFVSKPVDIN
VLRGLVRHALELNNSERLRAAPPQEQASRLLGDSAAMDTLRATIAKVARSQAPVYILGES
GVGKELVARTIHEQGARTAGPFVPVNCGAIPAELMESEFFGHKKGSFTGAHADKPGLFQA
ASGGTLFLDEVAELPLAMQVKLLRAIQEKSVRPVGAPGEVPVDVRILSATHKDLGALVAD
GRFRHDLYYRINVIELRVPPLRERTGDLPQLAHAILARLAAGQERHPPELTEAALAALAS
YPFPGNVRELENVLERALAMADGDRVDAADLHLPQVPVRLGAESGPAHAAHQEAVLDLDP
GTGALPSYIEQLERAAIQKALEDNRWNKTRTAAQLGITFRALRYKLKKLGMD
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgccggccagtccgctatcgtcttgcgccatgacccagagccgcagcgcccttatcgtc
gacgacgaacgcgacatccgcgagctgctggtcctcaccctgggccgcatgggcctgcgc
gtggataccgccgccaacctgagcgaggcgcgcgagctgctgggtcgcggccactacgac
ctgtgcctgaccgacatgcgcctgccggacggcaacggcatcgagctggtgggcgagatc
gcgcgccaccacccgcagaccccggtggccatgatcaccgccttcggcaacatggacctg
gcggtggaggcgctgaaggcgggggcgttcgacttcgtcagcaagccggtggacatcaac
gtgctgcgcggcctggtccggcacgcgctggaactgaacaacagcgagcgcctgcgcgcc
gcgccaccgcaggagcaggccagccgcctgctcggcgactccgcggccatggacaccctg
cgcgccaccatcgccaaggtcgcgcgcagccaggcgccggtctacatcctgggcgagtcg
ggcgtgggcaaggagctggttgcgcgcaccatccacgagcagggcgcacgcacggccggg
ccgttcgtgccggtcaactgcggcgcgatcccggccgaactcatggaaagcgagttcttc
ggccacaagaagggcagcttcaccggcgcccatgccgacaagccgggcctgttccaggcc
gccagcggcggcaccctgttcctggacgaggtggccgagctgccgctggcgatgcaggtc
aagctgctgcgcgcgatccaggaaaagtcggtgcgtccggtcggcgcgcccggcgaggtg
ccggtggacgtgcgcatcctgtcggccacccacaaggatcttggcgcgctggtggccgac
ggccgcttccgccacgacctgtactaccggatcaacgtgatcgagctgcgggtgccgccg
ctgcgcgagcgcaccggcgacctgccgcaactggcccacgccatcctcgcccgcctggcc
gccggccaggagcggcatccgcccgaactgaccgaggcggcgctggccgcactggccagc
taccccttccccggcaatgtgcgcgaactggagaacgtgctcgagcgcgcactggccatg
gccgatggtgaccgcgtcgacgcggccgacctgcacctgccgcaggtcccggtccggctt
ggcgccgaatccggcccggcccacgccgcgcaccaggaagcggtgctggacctggatcca
ggcaccggcgccctgccctcctacatcgagcaactggagcgcgcggccatccagaaggcg
ctggaggacaatcgctggaacaagacccgcaccgccgcgcagttgggcatcaccttccgc
gcgttgcgctacaagctcaagaagctggggatggattga
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