Pseudoxanthomonas koreensis: ACEJ41_12710
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Entry
ACEJ41_12710 CDS
T10879
Name
(GenBank) SdrD B-like domain-containing protein
Organism
pkq Pseudoxanthomonas koreensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SdrD_B
DUF11
CarboxypepD_reg
SpaA
CarbopepD_reg_2
CARDB
fn3_3
DUF7507
Dioxygenase_C
EMC7_beta-sandw
Motif
Other DBs
NCBI-ProteinID:
XGI13926
LinkDB
All DBs
Position
complement(2802036..2810195)
Genome browser
AA seq
2719 aa
AA seq
DB search
MDKQHDRAPATAQGSLSPARMSHGRIGAIRARILVLLAALAPLAAQAGIVPNSVNLPPDI
GMGLTVPATVNWSRVQAGSGDSFTLAIPAQLDVVLGTLPGGCSYDGGTRVVTCVVPDGGV
GASGNVSVDLVGAAVGGFNLTATGNNTPIPTAASVSANVRNSGDLTVGKAKTTPAGDAVA
GSPVVFVLSPDIAAGGNNVPAGATVVVTDNLPGNASHFTLTSRTFSGLTPSCNTVANANS
TRTLTCTYSGPFTPAQLNASTITVTGTQNANGTFTNEAAIASGNTSYFDRDTGNNLALVN
YNALPGTDLQAQGSFPSTYQPVNGSQDLVLTYRNNGPLAATGGTIDTVIPAGFVLGALPP
GCSQAPGSLTVGATTVSGTRVTCTTGAVASGATQGFTLPLTMPAAATAGNFPVVVAPPAG
MAESNPGNNAILLPYQVAEPFADLRLAKSKSPGSGPRAPGTAITTTLTVTNDVGSLAAAT
YDTGANPLRVVDYVRPEEVAGDVVTVSGSTPGWSCAVSPGVANHPPYTNDGRTKEIVCTS
TVAGALAVGASRQVAFTTTIDAVGAPVTLSNWACTGATALNMLGGGGPLPADPNPNGNND
CAGAGDSLVATPVVSGYAAVDIVKESSVDNIAWHDLVADAPILAATDNQMHWRITVATPD
LATNASQRRIPTLNLTDNLPGILNVTAPGAPAQSFITPDIQVTVTRGGVAGASGCPATIT
AGTSALNCSFSNVDPGETIVIGLDVSRPLLGSAARLTNTATLTSPNAILSGTMSDDAAVD
VEPRLDVAMTTKTVVPATPKVGEIVQFTLTAQNLGPGVIPAGDFTIVDDLFTGTPTLATP
AYEFESATPSNAALMTCSTSAQPGDITRVSCVNTQPVQRYQVRTVTVRARIKKPSGSLGA
AGSVLYPAASNTAWVELGAAHCEYRTETSTVPVGVSTACDDAAALSNNQRSVTFPVEVPA
IDLQQAKTAVFPGGQTQFLLGDTLRYRFTVRNAGPSRAEEIVMTDILDPIPAGFSFALVD
SGTTAPKNLNSGGPDAGFAFVAKNVSCSQPGGANSNVVCQLDPALGQSWLDAGQMVRFEL
ELTMTGTATGPVVFGNRAYVCADETNVYESSGRCDPDPAQAANNLASVNNTIFPTADLGV
AKTTLTAGPVDVGQPVQYQVVLTNNGTGTVQKMRLVDVLPPGFEWLDSGVHLPTAVATGA
TLSGPLSVAAAAPPAGTDNVCWISAGPASVTAPAQRQTVTCDLGSTTGPGEGFATGNTVT
VSLWARPVPGVYDGSAAAPFSVDRLNDAEVQPGRDATGNEVSIDSNPANNTDDSPIQVAA
AARLGGRVFFDPNDNGDVDPGDTGIAGVTLTLTGTDAHGNAVSLTTTSNAAGDYQFVGLP
PSDAAGYTIEQAQPAAYDNGQPQPNTPRPVRNGASVNTSAAGGAYAVANTATTSTIAGIV
LANGADAVQFDFPEYQGVSLSGFVFADYTRDDVFDIATLDTPIPGASVELLVWDPVAAGY
VPLDGGTVQLTGADGSYRFEGLRPSATYALRQLLPAGYLNLPSAIAPGQIAGVPCSPACQ
VQTGAAGDAAATDRIYDIQLVAGNGTQFNFGETVPVSVSGVVFFDTDNDGSQNVLADVGI
DGVEIRLSGTDDLGNPVNDTTTTAADGSFSFDNLRPGTYTLTEPTQPVGTINGITTAGSV
GGTPSGTATPVATVPSAIATIDLTAPGSASIDNLFAEIPTNSSIIGQVWMDADDDGLIDA
GEQGIRGVSVRLDGVDAAGNVVSLTTTTDAIGRYAFTNLAPGTYTVTEPVQPLGTINGET
VAGNIAGTVTGTATPRSTVPSAVAGIVLGVNQHSVENNFGEIPVESSISGVVWLDLNDNG
VIDPGEQGIPGVTIRLNGIDAAGNAVTREIVTDALGAYRFGGLLPGNYTVTEPEQPPGTS
NGQTVAGSVGGTATPVTNPVSRISGILLGPNQHSTANNFGEIGGGVIAGRVYNDRNDNGQ
VDPGETGIPGVEVVLTGTDDTGAQVRISTVTDREGRYRFDGLRPGTYTVTEPTQPPQTLN
GLTTPGSLGGDATPKSTTPSAISGIVLPPGGESLENNFGEIGDTPDMRVSKSVTPAVLYT
GTQASYSVVVRNAGQAASSGQYVVSDRLPTGVVLAGVPGGEGWNCTGDTGASDFTCRSDA
VLAAGATSTVISVAVRVGAAAGEAGMVHNAVLVEGGGEPEPALPTAGERNAFDNRVPELP
VCDPAITHNACRLPSEVVVAWPDVVVSKSADTQVFTVGEPASYTIRVRNIGERATDADYR
VEDRLPAGIVLAAAPAGDGWTCTGAAGATRLECISNRELAAGESHPGTIRVPVDVLPEAL
GDGPVNNAVVVAGGGEDSPRTPTPGERDTFEQRPHELDECDPAISQNLCRVPNEVLPAQE
AAVLSIAKRGDRSVAEIGDMVLYTIDIRHVSGGGLRQVDVLDRLPRGFTYIGGSARVDGV
AIADPTGTPGPLLVFDAGPLPAQGQKTLSYRLRVGVGADQGNGVNRARAHGCQRVGSCME
GAAPLPGSVPSNTAEYRVIVRGGVFASEGCVLGKIFVDCNRNHVQDHEELGIPGVRMYFE
DGTWMVSDSEGNYSYCGLPPNSHTLKVDPSTLPAGARLTTSSNRNLGDADSLFIDLKNGE
LHRADFIEGSCSNPVLEQVKARRTQGEVRAPETEPGQPALRFESKSARSPQQATDSANQR
PIVDPRPVTPAAGRQEAQP
NT seq
8160 nt
NT seq
+upstream
nt +downstream
nt
gtggacaagcagcacgacagggcgccggccacggcgcagggcagcctttcgcctgcgcgc
atgtcgcatggtcgaatcggcgcgatccgcgcccgcatcttggtcctgctggccgcactg
gcgccgctggccgcgcaggcgggcatcgtcccgaactcggtcaacctgcccccggacatc
ggcatgggcctgaccgtgccggcgaccgtcaactggtcgcgggtgcaggccggcagcggc
gacagcttcaccctggcgatcccggcccagctcgacgtggtgctcggcaccctgccgggc
ggctgcagctacgacggcgggacccgggtcgtcacctgcgtggttccggacggcggcgtg
ggcgccagcggcaacgtcagcgtcgacctggtcggtgcagcggttggcggcttcaacctg
accgcgaccggcaacaacacgcccatcccgaccgcagcgtcggtctcggccaacgtccgc
aacagtggcgacctgaccgtcggcaaggccaagaccacgccggccggcgacgcggtggcc
ggcagcccggtggtgttcgtgctctcgccggacatcgccgccggcggcaacaacgtgccc
gccggtgccacggtggtggtgaccgacaacctgcccggcaacgcctcgcacttcaccctc
accagccgcaccttctccgggctgacccccagctgcaacacggttgccaacgccaacagc
acccgcaccctgacctgcacctacagcggcccgttcacccccgcccagctcaacgccagc
acgatcaccgtcaccggcacccagaacgccaacggcaccttcaccaacgaagcggcgatc
gcctcgggcaacaccagctacttcgaccgcgacaccggcaacaacctggccctggtcaac
tacaacgccctgccgggtaccgacctgcaggcgcagggcagcttccccagcacctaccag
ccggtcaacggcagccaggacctggtcctgacctatcgcaacaacggcccgctggccgct
accggcggcaccatcgacaccgtcatcccggccggtttcgtgctcggcgctctgccaccg
ggctgcagccaggcaccgggctcactgaccgtcggcgccaccaccgtcagcggcacccgg
gtcacctgcaccaccggtgcggtcgccagcggcgccacccagggcttcaccctgccgttg
accatgccggccgccgccaccgccggcaacttcccggtggtggtcgcgccgcctgcgggc
atggccgaatccaacccgggcaacaacgccatcctgctgccctaccaggtcgccgagccg
tttgccgacctgcgcctggccaagagcaagtcgcccggcagcggtccgcgggcaccgggt
accgcgatcaccaccaccctgaccgtgaccaacgacgtcggcagcctggcggcggccacc
tacgacaccggcgccaacccgttgcgggtcgtggactacgtccgcccggaggaagtggcc
ggcgacgtggtcacggtgtccggctccaccccgggctggagctgcgcggtctccccgggc
gtggccaaccatccgccgtacaccaacgatggtcgtaccaaggagatcgtctgcaccagc
accgtcgccggtgcgctggcggtcggcgcctcgcgccaggttgccttcaccaccaccatc
gatgccgtcggcgctccggtgaccctgagcaactgggcctgcaccggtgccactgcactg
aacatgctcggcggcggtggtcctttgccggccgaccccaatcccaacggcaacaacgac
tgcgccggtgccggcgacagcctggtggccacgccggtggtctccggctatgcagcggtg
gacatcgtcaaggaatcctcggtcgacaacatcgcctggcacgacctggtggccgacgca
ccgatcctggccgcgaccgacaaccagatgcactggcggatcaccgtcgccaccccggac
ctggccacgaacgcgagccagcgacgcatcccgaccctcaacctcaccgacaacctgcca
ggcatcctcaacgtcaccgcgcccggtgcgcccgcacagagcttcatcaccccggacatc
caggtcaccgtcacccgtggcggcgtagccggcgccagcggttgcccggccacgatcacc
gccggcaccagcgccctgaattgcagcttcagcaacgtcgatccgggcgagaccatcgtc
atcggcctggacgtgtcacggccgctgctgggcagcgccgctcgcctgaccaacaccgcg
accctcacctcgcccaacgcgatcctgtcgggaaccatgagcgacgacgcggcggtggac
gtggagccgcgcctggacgtggcgatgaccaccaagacggtggtcccggccacgcccaag
gtcggcgagatcgtccagttcaccctgaccgcgcagaacctgggcccgggcgtcatcccg
gccggcgacttcaccatcgtcgacgacctgttcaccggcacgcctacgctggccacgccg
gcctatgagttcgagagcgcgacaccgtccaacgcggcgctgatgacgtgctccaccagc
gcccagcccggcgacatcacccgggtttcgtgcgtgaacacccagccggtgcagcgctac
caggtccgcaccgtcaccgtgcgcgcgcgcatcaagaagcccagcggcagtctcggcgcg
gcaggctcggtgctgtatccggcggcgagcaacaccgcgtgggtggaactgggcgcggcc
cactgcgaataccgcaccgagaccagcaccgtgccggtcggtgtctcgactgcctgcgac
gacgccgcggcgctgtctaacaaccagcgcagcgtcaccttcccggtggaagtgccggcg
atcgacctgcagcaggccaagaccgcggtattcccgggcggccagacccagttcctgctg
ggcgacaccctgcgctaccgcttcaccgtgcgcaacgccggtccctcgcgcgccgaggag
atcgtgatgacggacatcctcgatccgatcccggccggcttcagcttcgccctggtggac
agtggcaccaccgcgccgaagaacctgaactccggcggcccggacgccggtttcgccttc
gtcgccaagaacgtgagctgctcccagcccggcggcgccaacagcaatgtggtctgccag
ctcgacccggccctgggccagagctggctggacgccgggcagatggtccgcttcgagctg
gagctgaccatgaccggcaccgccaccggcccggtggtgttcggcaaccgcgcctacgtc
tgcgccgacgagaccaacgtctacgaatcctcgggcaggtgcgacccggatccggcccag
gccgccaacaacctggcctcggtcaacaacacgatcttccccaccgccgacctgggcgtg
gccaagaccacgctcaccgccgggccggtggacgtgggccagccggtgcaataccaggtg
gtgctgaccaacaacggcaccggcacggtgcagaagatgcgcctggtggacgtgttgccg
ccgggcttcgagtggctggacagtggcgtccacctgcccacggcggtcgccaccggcgca
accctgtccgggccgctgtccgtggccgcggcggcgccgccggcgggcaccgacaacgtg
tgctggatctcggccggtcccgccagcgtgaccgcgcctgcgcagcgccagaccgtgact
tgcgacctgggcagtaccaccggccctggagaaggttttgccaccggcaacacggtgacg
gtgagcctgtgggcgcgtccggttcccggcgtgtacgacggctcggcggccgcgccgttc
agcgtggaccggctcaatgatgccgaagtgcagcccgggcgcgatgccaccggcaacgag
gtgtcgattgactcgaatccggccaacaacaccgacgattcgccgatccaggtggctgca
gccgcgcgcctgggtggccgggtgttcttcgacccgaacgacaatggcgatgtggacccg
ggcgataccggcatcgccggcgtcaccctgaccctgaccggcaccgatgcgcacggcaat
gcggtcagcctgaccacgaccagcaacgcagccggcgactaccagttcgtgggcctgccg
ccctcggatgcggccggctacaccatcgagcaggcgcagcccgccgcctacgacaacggc
cagccccagcccaacacgccacggccggtgcgcaatggcgccagcgtgaacaccagcgca
gccggtggtgcctatgcggtggccaacaccgccaccaccagcaccatcgccggcatcgtg
ctggccaacggcgccgacgcggtgcagttcgatttccccgagtaccagggcgtgtcgctg
tcgggcttcgtgttcgccgactacacccgcgatgacgtgttcgacatcgccaccctggac
acgccgatcccgggtgcctcggtggagttgctggtatgggatccggtcgctgcaggctat
gtcccgctcgatggcggcacggtgcagctcaccggtgccgatggcagctaccggttcgag
ggcctgcgtccgtcggccacgtatgcgctgcgccagctgctgcctgcgggctacctgaac
ctgcccagcgccatcgcccccggccagatcgcgggcgtgccctgcagccccgcctgccag
gtgcagaccggcgcggccggtgatgcggccgctaccgaccggatctacgacatccagctg
gtggccggcaacggcacccagttcaacttcggcgagaccgtgccggtatccgtgtccggc
gtggtgttcttcgacaccgacaacgacggcagccagaacgtgctggccgacgtgggcatc
gacggggtcgagatccgcctgtccggtaccgacgacctgggcaacccggtcaacgacacc
accaccaccgcggccgatggcagcttctcgttcgacaacctgcgtccgggcacctacacc
ctgaccgagccgacccagccggtcggcaccatcaacggcatcaccaccgccggcagcgtc
ggcggcacgcccagtggcacggccacgccggtggccaccgtgcccagcgcgatcgccacg
atcgatctcaccgcgccgggcagcgcgtccatcgacaacctgtttgccgagatcccgacc
aatagctcgatcatcggccaggtctggatggatgcggacgacgacggcctgatcgacgcc
ggcgaacagggcatccgcggcgtcagcgtgcgcctggatggcgtggacgccgcaggcaac
gtggtgtccctgaccacgaccaccgatgcgatcggccgctacgcattcaccaacctcgcg
ccgggcacctacacggtcaccgagccggtgcagccgctgggcaccatcaatggcgaaacg
gtcgccggcaatatcgcgggcaccgtcaccggcaccgccacgccgcggtctaccgtgccg
tcggccgtcgccggcatcgtgctgggcgtcaaccagcattcggttgaaaacaacttcggc
gagatcccggtcgagagttcgatctcgggcgtggtgtggctggacctgaacgacaacggg
gtgatcgacccgggcgagcagggcatccccggtgtgaccatccgcctgaacggcatcgac
gctgccggcaatgccgtcacccgcgagatcgtcaccgatgcactgggcgcctaccgcttc
ggcgggctgttgccgggcaactacacggtgaccgaaccggagcaaccgccgggcaccagc
aacggccagaccgtcgccggcagcgtcggcggcacggccacgccggtcaccaacccggta
tcgcggatcagcggcatcctgctgggccccaaccagcattccaccgccaacaacttcggc
gagatcggtggcggcgtcatcgccggccgcgtgtacaacgaccgcaacgacaacggccag
gtcgatccgggcgagaccggcatccccggggtggaagtcgtgctgaccggcaccgacgac
accggtgcgcaggtgcgcatcagtaccgtgaccgaccgcgagggccgctaccgtttcgac
ggcctgcgcccgggcacctacacggtgaccgagccgacccagccgccacagacgctcaat
ggcctgaccacgcccggcagcctcggtggcgatgcgactccaaagtccaccacgccatcg
gccatcagcggcatcgtgctgcccccgggcggtgaatcgctggagaacaatttcggcgag
atcggcgatacgccggacatgcgggtcagcaagtcggtcaccccggcggtgctgtacacc
ggcacccaggccagctacagcgtagtggtgcgcaacgccggacaggccgcgtccagcggc
cagtacgtggtcagcgaccgcctgccgaccggcgtggtcctggccggcgtgcccggcggc
gaaggctggaactgcaccggggacaccggcgcgtccgatttcacctgccgcagcgacgcg
gtcctggcagcaggcgccacctccacggtgatcagcgtcgcggtcagggtcggcgcagcc
gccggcgaggccggcatggtgcacaacgcggtgctggtggagggcggcggcgaacctgag
ccggcgttgccgacggccggcgagcgcaacgcattcgacaaccgggtgccggagctgccg
gtgtgcgatccggcgatcactcacaacgcctgccgcctgcccagcgaggtggtggtggcg
tggccggacgtggtggtcagcaagagtgccgacacccaggtgttcaccgtgggcgagccg
gcctcctacacgattcgcgtgcgcaacatcggcgagcgtgccaccgatgcggattatcgg
gtcgaggaccgcctgccggccggcatcgtgcttgccgcagccccggccggtgacggctgg
acgtgcacaggcgctgccggcgccacgcgcttggagtgcatcagcaaccgcgagctggcg
gccggggaaagccaccccggcaccatccgcgtgcccgtggacgtgctccccgaagcactg
ggcgatggcccggtgaacaatgccgtggtcgtggccggcggtggcgaggacagcccgcgc
acgcccacgcccggcgagcgcgacaccttcgaacagcggccgcacgagctcgacgagtgc
gacccggcgatcagccagaacctgtgccgggtgcccaacgaagtactgccggcgcaggaa
gcggcggtgctgagcatcgccaagcgtggcgaccgctcggtggccgagatcggcgacatg
gtcctgtacaccatcgacatccgccacgtatccggaggcgggttgcgccaggtcgacgtg
ctcgaccggctgccgcgcggcttcacctacatcggtggcagcgcgcgcgtggatggcgtg
gccatcgccgatccgaccgggacacccggcccgttgctggtgttcgatgcagggccgctg
ccggcccagggccagaagaccctgagctaccggctgcgcgtgggcgttggcgccgaccag
ggcaacggcgtcaaccgggcccgggcgcatggctgccagcgcgttggcagctgcatggaa
ggtgccgcgccgctgcccggaagcgtgccgtccaacaccgccgagtaccgcgtcatcgtg
cgcggcggcgtgtttgccagcgagggctgcgtgctgggcaagatcttcgtggactgcaac
cgaaaccatgtgcaggaccacgaggagctcggcatccccggcgtgcgcatgtacttcgag
gacggcacctggatggtgtccgattcggagggcaattacagctactgcggcctgccgccc
aacagccacacgctcaaggtggacccgtccaccctgccggccggtgcacgcctgaccacc
agcagcaaccgcaacctcggcgatgcggacagcctgttcatcgatctgaagaacggcgag
ttgcaccgcgccgatttcatcgagggcagctgttccaacccggtgctcgagcaggtcaag
gcccgccgcacccagggcgaggtgcgtgcccccgagaccgaacccggccagccggcactg
cgcttcgagagcaagtcggcgcgcagcccgcagcaggccaccgattcggccaaccagaga
ccgatcgtggatccccgacccgtgacgcccgccgcaggccggcaggaggcgcagccatga
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integrated database retrieval system
