Pseudoxanthomonas koreensis: ACEJ41_12920
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Entry
ACEJ41_12920 CDS
T10879
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pkq Pseudoxanthomonas koreensis
Pathway
pkq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACEJ41_12920 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkq03400
]
ACEJ41_12920 (recD)
Enzymes [BR:
pkq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACEJ41_12920 (recD)
DNA repair and recombination proteins [BR:
pkq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACEJ41_12920 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
AAA_11
UvrD_C_2
Viral_helicase1
RecD_N
UvrD-helicase
Helicase_RecD
SH3_13
AAA_22
UvrD_C
Mg_chelatase
T2SSE
DEAD
nSTAND3
Herpes_Helicase
SLFN-g3_helicase
AAA_29
FtsK_SpoIIIE
NTPase_1
TrwB_AAD_bind
AAA_7
AAA_28
AAA_16
Rad17
Motif
Other DBs
NCBI-ProteinID:
XGI13964
LinkDB
All DBs
Position
complement(2864077..2865996)
Genome browser
AA seq
639 aa
AA seq
DB search
MSLLNALYRGGQLRTLDHALAQSLRRLDPDTPDLVLAAAALASLAVAAGHAGFDPAQPQR
LIEAPIDWPTPGAWHAALQSSRWVAHPDTGNTESAADVPLVYEHGLLYLRRYREYERRLA
EGLRRIGRAAPQAASDDAAVPASLSDLFAKLFPDASGDDRQAEAAIAALHHHLLLVTGGP
GTGKTTTITRMLVLLTAQALQAGAAPPRIALAAPTGRAAERMAESVRNAVHTLSALGIDS
ELADHLPTTGTTLHRLLGTIPDSPDFRHHADNPLPFDMVVVDEASMIDLPLMAKLVEAVS
DGARLVLLGDPDQLPSVEAGDVLAGILAAATSAAPAPTTTAHAGAIPVAAQPAQTTSTAF
PARHVHLARGYRQSAALDLAPLATAVREGDSATALSLLRSARLSGVHFHEGDTDPLHTHR
DHLLAHWAALANATDPAQALANAARLRILTAVREGPQGARSLNARIEDLLAGTRRGTGPA
STANRYFHGRLLLITENSYRHRLFNGDIGICLRREASPVLGRSEASLAGHDDNGTVMAWF
PGDDPNNPRPFHPAALPAHDSAFAMTVHKAQGSEFDEVWLVLPERDNRVLSRELVYTGMT
RARKTLHVAGSADTIVDALSRHAGRWSGLGWRLGAREST
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctcaacgccctgtaccgcggcggccagctgcgcacgctcgaccatgcattg
gcccagagcctgcgccggcttgatccggacacgcccgacctcgtcctcgccgccgccgcg
ctggcctcgctcgcggttgccgccggccatgccgggttcgatcccgcgcagccgcagcgc
ctgattgaagcgcccatcgactggcccacgcccggcgcctggcatgccgcgctgcaatcc
tcgcgctgggttgcccatcccgacaccggcaataccgaatcggctgccgacgtcccgctc
gtgtacgagcacggcctgctctacctgcgccgctaccgcgagtacgaacgccgcctcgcc
gaaggcctgcgccgcatcggccgcgcggcgccgcaggccgcaagcgatgacgcggcggtg
cctgcgtccctgtccgacctcttcgccaagctgttccccgacgcctcgggcgatgaccgc
caggccgaagccgccatcgccgcgctccaccaccacctgctgctggtcaccggcggcccc
ggcaccggcaagaccaccaccatcacccgcatgctggtgctgctgaccgcgcaggcgctg
caggccggcgccgcgccgccgcgcatcgccctggccgcgcccaccggccgcgccgccgaa
cgcatggccgagagcgtgcgcaacgccgtgcacaccctgtccgcgctcggcatcgactcg
gaactcgcagaccaccttcccaccaccggcaccaccctgcaccgcctgctcggcaccatt
cccgacagccccgatttccgccaccacgccgacaacccgctgcccttcgacatggtggtg
gtggacgaggcctccatgatcgacctgccgctgatggccaaactggtcgaagccgtgtcc
gacggcgcccgcctggtcctgctcggcgaccccgaccagctgccctcggtggaagcgggc
gatgtgcttgccggcatcctcgctgccgccacatccgccgcccccgctcccacgacaaca
gcccatgcgggagcgatccctgtggcagcccagcctgcgcaaaccaccagcaccgctttc
cccgcccgccacgtgcacctcgcccgcggttaccgccagagcgccgccctcgacctcgcc
cccctcgccaccgccgtgcgcgaaggcgacagcgccaccgccctgtccctgctgcgcagc
gcccggctttccggcgtccacttccacgaaggtgacaccgatccgctgcacacccaccgc
gaccacctgctcgctcactgggccgcgctcgccaacgccaccgaccccgcgcaagccctc
gccaacgccgcccgcctgcgcatcctcaccgccgtgcgcgaaggcccccagggcgcccgc
agcctcaacgcccgcatcgaagacctgctcgccggcacccgccgcggcaccggccccgcc
tccaccgccaaccgctacttccacggccgcctgctgctcatcaccgagaacagctaccgc
caccgcctgttcaacggtgacatcggcatctgcctgcgccgcgaagcaagtcccgttctg
gggcgaagtgaagcgagcctcgcagggcacgacgacaacggcaccgtgatggcctggttc
cccggcgacgaccccaacaacccgcgccccttccacccggccgcactgcccgcccacgac
agcgcctttgccatgaccgtgcacaaggcccagggcagcgaattcgacgaggtctggctg
gtgctgccggagcgcgacaaccgggtgctgtcgcgggagctggtgtacacggggatgacg
cgggcgcgaaagaccctgcacgtggcggggagcgcggacaccatcgtcgacgccttgtcc
cggcacgcgggtagatggtcggggctgggctggcggctcggtgccagggaatccacatga
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