Pseudomonas koreensis: AYO71_00365
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Entry
AYO71_00365 CDS
T04647
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pkr
Pseudomonas koreensis
Pathway
pkr03420
Nucleotide excision repair
pkr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AYO71_00365 (uvrD)
03430 Mismatch repair
AYO71_00365 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkr03400
]
AYO71_00365 (uvrD)
Enzymes [BR:
pkr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AYO71_00365 (uvrD)
DNA repair and recombination proteins [BR:
pkr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AYO71_00365 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AYO71_00365 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
Viral_helicase1
RHH_1
Motif
Other DBs
NCBI-ProteinID:
AMT86051
LinkDB
All DBs
Position
complement(82993..85176)
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRGIYEAYE
AACLRAGVIDFSELLLRALDLWRDHPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLGK
GGDSLMVVGDDDQSIYGWRGAKIENIHQYSSDFPDSETIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGDGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPARGI
GEKTVEAIREHARHSDVSMWEAMRQLVANKGLTGRAASALGAFIELIENLAAKCAEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARNFENTEEDEELTPLAAFLGHA
SLEAGDTQADEHEDSVQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGNQ
SMSGSSLFSGSEIPETGFVLGQAVRHSIFGEGVILNFEGSGAQARVQVNFSEGSKWLMLG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctcccttctgctgaactccctcaacgatgcccaacgccaggccgta
gcagcccccgttggccgtcagttggtcctggccggcgccggttccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgaaaacgcctcgcctcactccatcctg
tcggtgaccttcaccaacaaggccgctgcggagatgcgccatcgcatcgagcagttgctg
ggcatcaacccggccggcatgtgggtcggcaccttccacggcctcgcgcaccgcttgctg
cgggcgcactggcaggaagcgggcctgagccagaccttccagattctcgacagcgatgac
cagcaacggctggtcaagcgggtgatccgcgagctcggtctggacgagcaacgctggccg
gcgcgtcaggcgcagtggttcatcaacggccagaaagacgaaggtctgcggccgcaacac
attcaggccagcggcgacctgttcctcgctaccatgcgcggcatctacgaagcctacgag
gcagcgtgcctgcgggctggcgtgatcgacttctccgaactgctgctgcgtgcgctcgat
ctgtggcgcgatcacccgggcctgctggcgcattaccaaaagcgcttccggcatattctg
gtcgacgaattccaggacaccaacgccgtgcagtacgcctggttgcgcctgctcggcaag
ggcggcgacagcctgatggtggtcggcgacgacgaccagtcgatttacggctggcgcggg
gcgaagatcgagaacatccatcagtactcttccgacttcccggactccgagacgattcgt
ctggaacagaattaccgctccaccgccggcatcctcaaagccgccaacgctttgatcgcc
aacaacaccgggcgtctcggtaaagagctgtggaccgacggtggcgacggcgaagcgatc
aatctgtacgccgcgttcaacgagcacgatgaagcgcgttacgtggtggaaaccatcgaa
agcgcgctgaaaaccggtctggcccgtagcgatatcgccattctgtaccgctccaacgcc
caatcgcgggtgcttgaagaagccctgctgcgcgagcgcatcccgtaccgcatctatggc
ggtcagcgcttcttcgaacgcgcggaaatcaagaacgccatggcctacctgcgcttgctc
gaaggtcgtggcaacgacgcggcgctggagcgagtgatcaacgtacccgcgcggggcatc
ggcgagaaaaccgtcgaagcgatccgcgagcatgcgcggcacagcgacgtgtcgatgtgg
gaagcgatgcgccagctggtggccaacaaaggccttaccggccgtgcagcgagcgcgctc
ggtgcatttatcgaactgatcgagaacctcgccgccaagtgcgccgagatgccgctgcac
ctgatgacgcaaaccgtcatcgaacaatccggcctgatcgcttatcacgaagcggaaaaa
ggtgagaaaggccaggcccgggtagaaaaccttgaggaactggtcagcgccgcacgtaac
ttcgagaacaccgaagaggacgaagaactcacgcccctggcggcattcctcggccacgca
tcgctggaggccggcgatactcaggccgacgagcacgaagacagtgtgcaactgatgacc
ctgcacagcgccaaaggtctggaattcccttacgtgttcctcgttggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagaaccggggcgtctcgaggaagaacggcgtctg
gcttacgtcggtatcacccgggccatgcagaatctggtcatgacctacgccgaaacccgg
cgcctgtacggcagcgaaacctacaacaaggtgtcgcgtttcgtccgcgaggtgcccaaa
ggcctgatccaggaagtgcgcctgtccaacagcgtcagccgaccgttcggcggcaaccag
tcgatgagcggcagcagcctgttcagcggcagcgagattccggaaaccggttttgtgctc
ggtcaggccgtacgtcactcgatcttcggcgaaggggtgatcctcaacttcgaaggttcc
ggcgcccaggcccgggtgcaggtgaacttcagcgaaggcagcaagtggctgatgctcggc
tatgccaagctggaagcgatctaa
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