Pseudomonas koreensis: AYO71_00705
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Entry
AYO71_00705 CDS
T04647
Name
(GenBank) type VI secretion protein
KO
K11893
type VI secretion system protein ImpJ
Organism
pkr
Pseudomonas koreensis
Pathway
pkr02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
AYO71_00705
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pkr02044
]
AYO71_00705
Secretion system [BR:
pkr02044
]
Type VI secretion system
Imp/Vas secretion system core components
AYO71_00705
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Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
AMT86117
UniProt:
A0A142N359
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All DBs
Position
164749..166080
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AA seq
443 aa
AA seq
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MNTHKVIWQEGMLLRPQHFQHNDRYYDHQMKTRTQLLGGYTWGFLNLEIDLQFLNMGKLV
ISEASGILPDGSLFELGGNTEPLALDVPPNTGNTPIYLALPLVTGNHIEARRPEQSDVLA
RYTAYDAEVADSNAGDDSASQVSCGRPDFKLLLGEQQSDQAYVKLKICDVLDTTPDGVIS
LDPDFVPTYIQAHASSYLLSCLKEVISMLSHRGDTIAERIRSNGKVGGAEVGDFMMLQLI
NRTELLLRHYLGLEQVHPEELYRTLLTMLGDLATFSGESKRPRLDSRYSHADQGASFRKL
MEAIRQVLSMVLEQHAIELILQARQYGIIVSPLHDHKLLGSASFVLAASANCDSEELRQR
LPQHLKVGPVERIRQLVNLHLPGIKVKPLPVAPRQIAFHSNKTYFILELSSEDLAQLERS
GGFAFHVSGEFAELELKFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccataaagtcatttggcaggaaggcatgctgctgcgaccgcagcacttccag
cacaacgatcgttattacgatcaccagatgaaaacccgcacgcaattgctcggtggctac
acctggggttttctcaatctggaaatcgacttgcagttcctcaacatgggcaaactggtg
atcagtgaagcctcggggattctgccggacggcagcctgttcgaacttggtggcaacact
gagccgctggcgctggacgtgccgccgaacaccggcaacacgccgatctatctggcgctg
ccgctggtcactggcaaccacatcgaggcccggcgcccggagcaatccgacgtgctcgcg
cgctacaccgcgtatgacgccgaagtcgccgactccaacgccggcgatgattccgccagc
caggtcagctgcggtcgtccggacttcaaactgttgctcggcgagcagcagagcgatcag
gcctacgtgaagctgaaaatctgcgacgtgctcgacaccacgcccgacggcgtgatcagc
ctcgacccggatttcgtcccgacctacattcaggcccacgcctccagctatctgctgtcg
tgcctgaaagaagtcatcagcatgctcagccaccgtggcgacacgattgccgagcggatt
cgctccaacggcaaggtcggcggcgctgaagtcggcgacttcatgatgttgcaactgatc
aaccgcaccgaactgctgctgcgccattacctcggtcttgagcaggtgcacccggaagag
ttgtatcgcacgctgctgaccatgctcggcgatctggcgaccttctccggcgagagcaaa
cgcccgcgtctggacagccgctattcccacgcggatcagggcgcgagctttcgcaaactg
atggaagcgatccgccaagtgctgtcgatggtgctcgaacagcacgccatcgaactgatc
ctgcaggcgcgtcagtacggcatcatcgtctcgccgttgcacgatcacaaactgctcggc
tcggcctcgttcgtgctggcagccagtgccaactgcgactccgaagaactgcgtcagcgc
ttgccgcagcacctcaaggtcggcccggtggaacgcatccgccaactggtcaacctgcac
ttgccggggatcaaggtcaaaccgttgccggtggccccacggcagatcgcgttccactcg
aacaaaacctatttcatcctcgaactcagttccgaagacctggcacaactcgagcgctcc
ggcggtttcgcgttccacgtgtccggcgaattcgccgagcttgaactgaaattctgggcc
atcaggaactga
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