KEGG   Pseudomonas koreensis: AYO71_01125
Entry
AYO71_01125       CDS       T04647                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pkr  Pseudomonas koreensis
Pathway
pkr00300  Lysine biosynthesis
pkr00470  D-Amino acid metabolism
pkr01100  Metabolic pathways
pkr01110  Biosynthesis of secondary metabolites
pkr01120  Microbial metabolism in diverse environments
pkr01230  Biosynthesis of amino acids
Module
pkr_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pkr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    AYO71_01125
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    AYO71_01125
Enzymes [BR:pkr01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     AYO71_01125
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AMT86193
LinkDB
Position
complement(253213..254460)
AA seq 415 aa
MDAFNYRGGELFAEGVALSAIADRFGTPTYVYSRAHIEAQYLAYADALAGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGSADKIVFSGVGKTRDDMRRALEVGVH
CFNVESTDELERLQVVAAELGVRAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYVRAAHLPNLEVVGVDCHIGSQLTTLPPFIDALDRLLELVDRLGDCGIHLRHIDLGGGL
GVRYRDEEPPLAADYIKAVRERLDGRDLALVFEPGRFIVANGGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVTAVKPRDSAARKYDIVGPICETGDFLAKDRELALEEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGDQVFEVRRRETVAELFAGESLLPE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggacgcttttaactaccgtggcggggagctgttcgcggaaggtgtggcgctgtccgcc
atcgccgaccgcttcggtacgcccacctatgtctactcgcgcgcgcacatcgaagcgcag
tatctggcctacgccgatgcgctggccggtatgccgcatctggtctgcttcgcggtcaaa
gccaactccaacctcggcgtactgaatgtcctggcccgtctcggcgccggtttcgacatc
gtttcccgtggcgagctggaacgtgtactggccgcaggtggcagcgccgacaagatcgtt
ttctccggcgtcggcaagacccgtgacgacatgcgccgcgccctcgaagtcggcgtgcac
tgcttcaacgtcgagtccaccgacgagcttgagcgcctgcaagtagtcgccgccgagctg
ggtgttcgcgccccggtttcgctgcgcgtgaacccggacgtcgatgccggcacccacccg
tacatttccaccggtctcaaagagaacaagttcggcatcgccattgccgacgccgaagac
gtgtacgtgcgcgccgcgcatctgccgaacctggaagtggtgggcgttgactgccatatc
ggttcgcaactgaccaccctgccgccgttcattgatgcactcgatcgcctgctggagctg
gtcgaccgcctcggcgattgcggcattcacctgcgccacatcgatctcggtggcggcctg
ggcgtgcgttaccgcgacgaggagccgccgctggctgccgactacatcaaagccgtgcgc
gaacgtctcgacgggcgtgatctggcgctggtgttcgagccaggccgcttcatcgttgcc
aatggcggcgtgttgctgacacaggtcgaatacctcaagcacaccgagcacaaggatttc
gccatcgtcgatgcggcgatgaacgacctcatccgtccagcgctgtatcaggcgtggatg
gacgtcacggcggtgaaaccgcgcgacagcgctgcacgcaagtacgacatcgtcggcccg
atctgcgaaaccggcgacttcctcgccaaggaccgcgagcttgcgctggaagaaggcgat
ctgctggcggtgcattcggccggcgcctacggttttgtcatgagctccaactacaacacc
cgtggccgtgccgccgaggtgctggtggatggtgatcaggtttttgaagtgcgtcgccgc
gaaaccgtggccgagctgtttgccggcgaaagcctgctgccggagtaa

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