Pseudomonas koreensis: AYO71_01125
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Entry
AYO71_01125 CDS
T04647
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pkr
Pseudomonas koreensis
Pathway
pkr00300
Lysine biosynthesis
pkr00470
D-Amino acid metabolism
pkr01100
Metabolic pathways
pkr01110
Biosynthesis of secondary metabolites
pkr01120
Microbial metabolism in diverse environments
pkr01230
Biosynthesis of amino acids
Module
pkr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AYO71_01125
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AYO71_01125
Enzymes [BR:
pkr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AYO71_01125
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AMT86193
LinkDB
All DBs
Position
complement(253213..254460)
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AA seq
415 aa
AA seq
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MDAFNYRGGELFAEGVALSAIADRFGTPTYVYSRAHIEAQYLAYADALAGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGSADKIVFSGVGKTRDDMRRALEVGVH
CFNVESTDELERLQVVAAELGVRAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYVRAAHLPNLEVVGVDCHIGSQLTTLPPFIDALDRLLELVDRLGDCGIHLRHIDLGGGL
GVRYRDEEPPLAADYIKAVRERLDGRDLALVFEPGRFIVANGGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVTAVKPRDSAARKYDIVGPICETGDFLAKDRELALEEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGDQVFEVRRRETVAELFAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaactaccgtggcggggagctgttcgcggaaggtgtggcgctgtccgcc
atcgccgaccgcttcggtacgcccacctatgtctactcgcgcgcgcacatcgaagcgcag
tatctggcctacgccgatgcgctggccggtatgccgcatctggtctgcttcgcggtcaaa
gccaactccaacctcggcgtactgaatgtcctggcccgtctcggcgccggtttcgacatc
gtttcccgtggcgagctggaacgtgtactggccgcaggtggcagcgccgacaagatcgtt
ttctccggcgtcggcaagacccgtgacgacatgcgccgcgccctcgaagtcggcgtgcac
tgcttcaacgtcgagtccaccgacgagcttgagcgcctgcaagtagtcgccgccgagctg
ggtgttcgcgccccggtttcgctgcgcgtgaacccggacgtcgatgccggcacccacccg
tacatttccaccggtctcaaagagaacaagttcggcatcgccattgccgacgccgaagac
gtgtacgtgcgcgccgcgcatctgccgaacctggaagtggtgggcgttgactgccatatc
ggttcgcaactgaccaccctgccgccgttcattgatgcactcgatcgcctgctggagctg
gtcgaccgcctcggcgattgcggcattcacctgcgccacatcgatctcggtggcggcctg
ggcgtgcgttaccgcgacgaggagccgccgctggctgccgactacatcaaagccgtgcgc
gaacgtctcgacgggcgtgatctggcgctggtgttcgagccaggccgcttcatcgttgcc
aatggcggcgtgttgctgacacaggtcgaatacctcaagcacaccgagcacaaggatttc
gccatcgtcgatgcggcgatgaacgacctcatccgtccagcgctgtatcaggcgtggatg
gacgtcacggcggtgaaaccgcgcgacagcgctgcacgcaagtacgacatcgtcggcccg
atctgcgaaaccggcgacttcctcgccaaggaccgcgagcttgcgctggaagaaggcgat
ctgctggcggtgcattcggccggcgcctacggttttgtcatgagctccaactacaacacc
cgtggccgtgccgccgaggtgctggtggatggtgatcaggtttttgaagtgcgtcgccgc
gaaaccgtggccgagctgtttgccggcgaaagcctgctgccggagtaa
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