Pseudomonas koreensis: AYO71_03440
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Entry
AYO71_03440 CDS
T04647
Name
(GenBank) LysR family transcriptional regulator
KO
K27042
LysR family transcriptional regulator, trpBA operon transcriptional activator
Organism
pkr
Pseudomonas koreensis
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkr03000
]
AYO71_03440
Transcription factors [BR:
pkr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AYO71_03440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_5
HTH_20
MarR_2
HTH_30
HTH_23
HTH_IclR
HTH_24
I-HmuI_NUMOD-like
MarR
HTH_11
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AMT86630
LinkDB
All DBs
Position
complement(749319..750236)
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AA seq
305 aa
AA seq
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MSHDLPPLNALRAFEATARLNSVSQAAEQLHVTHGAVSRQLKALEEHLGVSLFVKDGRGL
KLTDAGVRLRDASAEAFDRLRSVCAELTQSTADAPFVLGCSGSLLARWFIPRLGRLNADL
PDLRLHLSAGEGDLDPRRPGLDALLLFAEPPWPADMQVYELAAERIGPVMSPLFSGYQNL
HDAPGAELLKQPLLHTTSRPQAWPSWAQQNHLDPKALKLGQGFEHLYYLLEAAVAGLGVA
IAPEPLVMEDLKAGRLVAPWGFCETPAQLALWLPKRAADGRARQLAQWLKNELRQPDHSP
RLNKK
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagccacgaccttcccccgcttaatgccttgcgcgccttcgaggccaccgcccgtctg
aacagcgtcagtcaggctgccgagcagctgcatgtcactcacggcgcggtcagccgccag
ctgaaagcgcttgaagaacatctcggcgtgagcctgtttgtcaaggacggacgcggcttg
aaactcacagatgccggcgtgcgtctgcgcgatgccagcgcagaggcgttcgatcggttg
cgcagtgtttgcgccgaactcacgcaaagcactgccgatgcgccattcgtgcttggctgt
tccgggagcctgctggcgcgctggttcattccccgcctggggcggttgaatgccgatttg
cctgatctgcgactgcacctgtcggccggtgaaggcgatctcgaccctcggcgcccgggc
cttgatgcgctgttgctgttcgccgagccaccgtggccggccgatatgcaggtctacgag
ctggcggcagaacgcatcggcccggtgatgagcccgttattcagcggttatcagaacctg
cacgacgctcctggcgcagaattgctcaagcagcccttgctgcacaccacctctcgccca
caagcctggcccagctgggcgcagcaaaaccacctcgatcccaaggcgttgaagctcggg
caaggttttgagcatttgtattatttgctggaggcggctgttgcaggtctcggcgtggca
atcgcaccggagccgttggtaatggaagatctgaaggcaggacgcctggttgcgccatgg
ggcttctgcgaaaccccggcgcaactggcgttgtggctacccaagcgcgccgcggacggg
cgcgcccggcaactggcgcagtggctcaaaaacgagctgcgccagcctgatcactcaccg
cgcttgaacaaaaagtag
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