Pseudomonas koreensis: AYO71_03815
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Entry
AYO71_03815 CDS
T04647
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
pkr
Pseudomonas koreensis
Pathway
pkr02020
Two-component system
pkr02024
Quorum sensing
pkr02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AYO71_03815
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AYO71_03815
02025 Biofilm formation - Pseudomonas aeruginosa
AYO71_03815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkr03000
]
AYO71_03815
Transcription factors [BR:
pkr03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
AYO71_03815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
MarR_2
HTH_24
MarR
HTH_23
Sigma70_r4
GntR
Motif
Other DBs
NCBI-ProteinID:
AMT86695
LinkDB
All DBs
Position
851898..852575
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AA seq
225 aa
AA seq
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MQIRARLLSGQWFSHLPASFQDSLLALARERRLTAGQRLFQRGDAPCGLYAVLDGAVRIG
AVSEQGKEALLSLVEAPHWFGEICLFDGQPRTHDAYAVGSCTLLNVPQAALLKLLDEQPQ
YWRHLALLMSHKLRLAFINLEQLSLLPAPARLAHRLLMIAEGYGELDAPRRTLQLPQEQL
AAMLSLSRQTTNQILKDLQGQGIIGLAYGEIEILDAVRLRALATI
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattcgtgcacggttgctcagcggccagtggttcagtcatttgcctgcatctttt
caggatagcctgctggcgctggctcgggagcggcggctgacggcgggacaacgactgttc
cagcgtggcgatgcgccgtgcggtctgtatgcagtgctcgatggcgccgtgcgcatcggc
gcggtgagcgagcagggcaaggaggcgttgttgagtctggtggaggcgccgcactggttc
ggcgaaatctgcctgttcgatggccagcctcgcactcacgatgcctatgcagtcgggtcg
tgcaccttgctgaatgttccgcaagcggcgttgctcaaattgctcgacgaacagccgcag
tactggcggcatttggcgctgctgatgagccacaaattgcgcctggccttcatcaatctc
gaacagctgagcctgctgccagccccggcgcgtctcgcccatcggctgctgatgattgcc
gaaggctacggcgaactcgacgcaccacgccggacgctgcaactgccgcaggagcagctg
gcggcgatgctgtcgctgtcgaggcagaccaccaatcagatcctcaaggatctgcagggg
caggggattatcgggctcgcatacggcgaaatcgaaattctcgatgcggtgagattgcgt
gccttggccacgatctga
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