Pseudomonas koreensis: AYO71_05340
Help
Entry
AYO71_05340 CDS
T04647
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pkr
Pseudomonas koreensis
Pathway
pkr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AYO71_05340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkr03019
]
AYO71_05340
03009 Ribosome biogenesis [BR:
pkr03009
]
AYO71_05340
Messenger RNA biogenesis [BR:
pkr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AYO71_05340
Ribosome biogenesis [BR:
pkr03009
]
Eukaryotic type
Pre-60S particles
RNases
AYO71_05340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AMT86988
LinkDB
All DBs
Position
1208217..1208759
Genome browser
AA seq
180 aa
AA seq
DB search
MQNPQNLIWIDLEMTGLDPDNDVIIEMATIVTDSELNTLAEGPVIAIHHSDEVLARMDEW
NTRTHGNSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPICGNSICQDRRFLYTHMK
ALESYFHYRNLDVSTLKELAARWAPDVRDSFKKGSTHLALDDIRESIAELQHYRKHFIKF
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatccgcagaacctgatctggatcgacctggaaatgaccggtctggacccggac
aacgatgtcatcatcgaaatggccactatcgttaccgacagtgagctgaacacattggct
gaaggtccggtgattgccatccaccatagcgacgaagtgctcgcgcgcatggacgagtgg
aatacccgcacccacggcaactccggtctgacccagcgtgtgcgcgacagccgcatcagc
atggctgaggcagaagctgagaccatcgcctttctggaaaagtgggtgccgaagggcaag
tcgccgatctgcggcaatagcatctgccaggatcgtcgcttcctttatacccacatgaag
gcgctggaaagctacttccactatcgcaacctcgacgtctccacgctcaaggaactggcc
gcgcgctgggctccggatgtgcgcgacagcttcaagaagggcagcacccacctggcgctg
gatgacatccgcgaatcgatcgccgagctgcagcactaccgcaagcatttcatcaaattc
tga
DBGET
integrated database retrieval system