KEGG   Pseudomonas koreensis: AYO71_05935
Entry
AYO71_05935       CDS       T04647                                 
Name
(GenBank) type VI secretion protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pkr  Pseudomonas koreensis
Pathway
pkr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pkr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AYO71_05935
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pkr02044]
    AYO71_05935
Secretion system [BR:pkr02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AYO71_05935
SSDB
Motif
Pfam: Phage_GPD DUF6484 Phage_base_V
Other DBs
NCBI-ProteinID: AMT87101
LinkDB
Position
1364320..1365666
AA seq 448 aa
MFDPVNEPSFRLDVAGLSDPFEVLAFTGREALSEPFAFEIDVVIDDPHLDLASLLHRSAF
LCFGAPGQGVHGQLHSLVQHEHGHGLRLCRVRLGPRLDCLDLRLSQRIFSGRCVPQIIEQ
VLREHGIVGLQRRFDLHSDYPTRTFCTQYRESDLQLLQRLCAEARIHYYFEHHRDRHCLV
FGDDPTRMPHADVAPYQGEHDQRGVAPAVRQWQLHEDSQASQRGPSAEGHSDLPALRSGQ
WLPLDDHPFIECNRPWLLTRIEHRADQSLEPPYCNRLFAAARVPVCAPAAAQSKQRMHSL
QRAWVVSVDEPQPDCSRPVAVQFDWLYQGEGASPSHCWLPLAPDLNELPSAALADGVEVV
VSFLEGDPDQPVVSGVLQPSVLPEAAVEDDEPVSLPELLVSDGLQQLLQSGEPLLLLCLM
PGGGSFNHCAESVCSCRLLTALDQSSAR
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgttcgatccagtcaacgagccgtcgtttcgtctcgatgtagcgggcctgtccgacccc
ttcgaagttctcgcctttaccggaagggaagcgctcagcgaaccctttgccttcgagatc
gatgtggtgatcgacgatccgcatctggatcttgccagcctgctgcatcgttctgcgttc
ctgtgcttcggcgcgcccggccagggtgtgcacgggcagttgcacagccttgtccagcac
gagcatggccatggcttgcgtttgtgtcgagtgcgtctcgggccgaggctcgactgcctc
gacctgcgtttgagccagcgcattttcagtggccgctgcgtgccgcagatcatcgaacag
gttctgcgcgagcatggcatcgtcggcttgcaacgacgtttcgacctgcatagcgactac
ccgacccgcaccttctgcacgcaataccgcgaatccgatctgcaactgcttcagcgcctg
tgcgcagaggcacgcattcattattacttcgagcatcaccgcgacaggcattgcctggtg
ttcggcgacgatccgacgcgaatgccccatgcagacgtcgcgccctatcagggcgagcat
gaccagcgtggcgtcgctccagccgtccgccaatggcaactgcacgaagactcgcaggcc
agccagcgaggccccagtgccgaaggccacagcgatctgcccgccttgcgcagcggtcag
tggttgcccctggacgaccatcctttcatcgaatgcaaccgcccatggttgctgacccgc
atcgagcaccgtgccgatcagtctctcgaaccgccctattgcaatcgcctgttcgcggcc
gcgcgggtacccgtctgtgcgcccgccgctgcgcagtccaagcagcgcatgcacagcctg
cagcgagcctgggtggtcagcgtcgatgagccgcagccggattgctcgcggccggtggcg
gtgcaattcgactggctctatcagggcgaaggggcttcgccgagtcattgctggctgccc
ctcgcgcctgacctgaacgagctgccctcggcggcactcgctgatggtgtggaagtggtg
gtgagttttcttgagggcgaccccgatcagccggtggtcagtggcgtgctccagccatcg
gtgttgccagaggctgcggtcgaggacgatgaaccggtatcgctcccagaactgctggtg
agcgatgggttgcagcaactgttgcagtctggcgagccgttgctgctgctgtgcctgatg
ccgggcggtggcagcttcaaccactgcgccgagtccgtgtgcagttgccggctgctcacc
gcgctcgatcagagcagcgcacgatga

DBGET integrated database retrieval system