KEGG   Pseudomonas koreensis: AYO71_06250
Entry
AYO71_06250       CDS       T04647                                 
Name
(GenBank) exodeoxyribonuclease V subunit gamma
  KO
K03583  exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
Organism
pkr  Pseudomonas koreensis
Pathway
pkr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pkr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AYO71_06250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pkr03400]
    AYO71_06250
Enzymes [BR:pkr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     AYO71_06250
DNA repair and recombination proteins [BR:pkr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AYO71_06250
SSDB
Motif
Pfam: Exonuc_V_gamma RecC_C
Other DBs
NCBI-ProteinID: AMT87156
LinkDB
Position
1434567..1438019
AA seq 1150 aa
MSDAQSLNAAFMVVQSNSLDELRSLVVSIMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPEDDDLGGCGIAAAIDVQLPGSFMWQLYRMVLGREEIPAKSLLDKAPLTWRLMRLLPQV
IDRPHFEPLQRFLTNDSDLRKRYQLSERLADLFDQYQVYRADWLEDWAEGRHQLRNVRGE
IKPLPATSCWQAELWRALLDDVGEQGMAQSRAGVHQRFMERINILDKAPAALPPRVIVFG
ISSLPAQVLEALAGLARFSQVLLCVHNPCRHHWADIVADKDLLRHQYKRQQRKSGMPVVL
DAETLHQHAHPLLAAWGKQGRDYINLLDSYDDPNSYRAAFRDGRIDLFSEAQPHNMLNQL
QDDILELRPLNETRELWPAVDLTQDQSIRFHIAHSAQREVEILHDQLLARFSADPALRPR
DVIVMVPDIDSYAPHIRAVFGQLDRFDPRFIPFTLADQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRARFGVEERDLPTLHRWIEGAGVRWGMSAEQRAGLGLPEELEQNS
WHFGLRRMLLGYAVGSADACAGIEPYDEIGGLDAALIGPLVALLDALEIAHQQLTQPAQP
KEWGLRLQALMQVFFQASNEHDDYLLTQLEELRETWLETCEAVGLTDELPLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARTQLYISWVGRSIRDNSERPASVLIGQLRDHLASGWRSID
PTQDLLEALTEEHPLQPFSARYFHEGEQLFSYASEWQVLHQEKTQQSEAPLLAPYVQEEP
LTLALLQDFLRNPVRHFFTQRLKVYFEAAQAPLADEEPFVLDALQRYTLSDSLLEAALSQ
PDDVDQALHARALRLQNSGLLPMAGFGECLQRELIEPLPDLLQRYQQLLTLWPTPLSSAI
PVSLDLQCLRLEGWLSSLHRRADGGLLSVTTIPNSIGSIKTRKWHRLTKSWVTHLVACAS
EHALTTALVASDDTLLLEPMERDRALRLLGDLLLAWQSGMRQPLPIAIKTAFAWLSQTDP
VKAEATARKAYDGDGQTSNGERRESPALLRQYPDFDALLADETFTGWCDALYRPLFEAPW
RSLSSEGARA
NT seq 3453 nt   +upstreamnt  +downstreamnt
atgtcggacgcccagtccctcaacgctgcattcatggtggttcagagcaacagtctcgat
gagctgcgcagtcttgtggtcagcatcatgcggcgctacccactggcacccctggaaaac
gaaatcgctttggtgcaaagcaacggcatcgcccaatggctcaaactggcattggccgaa
gatcctgaagacgatgaccttggcggttgcgggatcgctgcggcgattgacgttcaacta
cccggcagtttcatgtggcagctctatcgcatggtattgggacgagaagagattccggcg
aaatccctgctcgataaggctccgctgacctggcgcctgatgcgcctcttgccacaggta
atcgaccgcccacatttcgagccgctgcaacgcttcctcaccaatgacagcgatctgcgc
aagcgctatcaattgtcagagcgtctggccgatctgttcgaccaatatcaggtctaccgg
gccgactggctggaagattgggcggaaggccgccaccaactgcgcaatgtgcgaggtgaa
atcaagcctctgccagcgaccagttgctggcaggcagagttgtggcgagcgctgctggat
gacgtcggcgaacagggcatggcgcagagtcgtgccggcgtgcatcaacgcttcatggaa
cgcatcaacatactcgacaaggccccggctgcgctgccgccgcgcgtgatcgtctttggc
atttcttcattgcccgcacaagttcttgaagcgctcgccggtctggcgcgcttcagtcag
gttctgctttgcgtacacaacccctgtcgccatcactgggccgatatcgttgccgacaag
gatctgctgcgacatcaatacaagcgccaacaacgcaaaagcgggatgcccgttgtactt
gatgccgaaaccctgcatcagcacgcgcatccgttgctggccgcttggggcaagcaaggt
cgcgactatatcaacctgctcgacagctacgacgatcccaacagctaccgcgcagccttt
cgtgacggccgcatcgacctgttcagcgaagcccagccgcacaacatgcttaaccagctt
caggacgacatcctcgaattgcgccccctcaacgagactcgtgagctctggcccgctgtc
gacctgacgcaggaccaatcgatccggtttcacatcgcccacagtgcccagcgtgaagtc
gaaatcctgcacgatcaactcctggcgcgctttagcgccgacccggctctacgcccacgg
gacgtgatcgtgatggtccctgatatcgacagctacgcaccgcatatccgcgcggttttc
ggtcagctcgatcgatttgacccgcgcttcattccgttcactttggcggaccagggccag
cgtggccgcgatcctttgttgatcgcggtcgaacatttgctcaaattgccggacagtcgt
ttcccggtcagcgagattctcgacctgctcgatgttccagctctgcgtgctcgctttggc
gtagaggaacgtgacctgccaaccctgcaccgctggatcgagggtgccggcgtgcgttgg
ggcatgagtgccgaacaacgggccggtctcggattgcctgaggaactggagcagaacagc
tggcatttcggtctacgccgaatgctgctgggctacgccgtcggcagtgccgatgcatgt
gcaggtatcgagccttacgacgaaattggtgggctggatgctgccctgatcgggccactg
gtggctctgctggatgccttggaaatcgctcaccagcaactcacgcaacctgctcaaccg
aaagagtgggggctgcgcttgcaggcgctgatgcaggtgttctttcaggcgagcaacgag
cacgacgactacctgctgacccagctcgaagagcttcgcgagacttggctggagacttgc
gaggcggtcggcctgactgacgaattgccgctgactgtcgtgcgcgaagcctggctcgcc
gggctggatcagggccgattgtcgcaacgattcctcgccggtgcggtgaatttctgcacc
ttgatgccgatgcgtgccattcctttcaaactggtatgtctgctgggcatgaacgacggc
gattatccccgcgcgcagccgccgctggacttcgatctgatgggtagtgattaccgccca
ggcgaccgctcacgacgtgaagacgaccgttacctgttactcgaagcgctgttatccgca
cgcactcagctctatatcagttgggtcggtcgcagcattcgcgacaacagcgaacgaccc
gcctcggtgctcatcggccagttgcgcgatcacctcgccagcggctggcgttcaatcgac
cctacccaggatctattggaagcgctgaccgaagaacaccccctgcaacctttcagtgcc
cgctatttccacgaaggcgagcaactgttcagctacgccagtgagtggcaggtgttgcat
caagagaaaacgcagcaaagtgaagcaccgttactcgcgccatatgttcaagaggaaccg
ttgacgctggcattgctgcaggattttctgcgtaatccggttcggcattttttcacacaa
cgtctcaaggtctatttcgaggctgcgcaagcgccgttggccgatgaagaacctttcgtg
ctggacgcgctacagcgctacacgctgagcgacagtttgctggaagccgcactcagtcag
ccggacgatgtcgatcaggcactgcacgcccgggcgctgcgcctgcaaaacagtggtctg
ctgcctatggccggttttggcgaatgcctacagcgtgaactgatcgaaccgctaccggat
cttctgcagcgttatcaacagttgctgacgttatggccgacgccattgagtagtgcaatc
ccggtcagtctcgacttgcagtgtctgcggttggaaggctggctctcgagcctgcaccga
cgcgccgatggcggcctgctgtcggtcacgaccattcccaacagcatcggctcgatcaaa
actcgcaagtggcatcggctgaccaaatcgtgggttacccatctggtcgcctgcgccagc
gagcatgcgctgaccacggcattggtcgccagtgacgatacgttgttgctggagccaatg
gagcgagaccgagcgttgcgtttgctcggtgacctgcttcttgcgtggcaatcaggcatg
cgccagcccttgccgattgcgataaaaaccgcgttcgcctggttgtctcaaactgacccg
gtcaaagccgaagcaactgcgcgaaaagcctatgacggtgacggccagaccagcaacggc
gagcggcgtgaaagcccggcactgctccggcaatatcccgacttcgatgcattgttggca
gacgaaaccttcaccggctggtgcgacgccttgtaccgcccattattcgaagcgccgtgg
cgttccttgtccagcgaaggtgcgcgcgcatga

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