Pseudomonas koreensis: AYO71_06710
Help
Entry
AYO71_06710 CDS
T04647
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pkr
Pseudomonas koreensis
Pathway
pkr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AYO71_06710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkr03019
]
AYO71_06710
03016 Transfer RNA biogenesis [BR:
pkr03016
]
AYO71_06710
Enzymes [BR:
pkr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AYO71_06710
Messenger RNA biogenesis [BR:
pkr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AYO71_06710
Transfer RNA biogenesis [BR:
pkr03016
]
Prokaryotic type
tRNA degradation factors
AYO71_06710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
TraK_C
OB_RRP5_4th
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
AMT87240
LinkDB
All DBs
Position
1543802..1545907
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSSVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQQAASSLDMVV
AGTSDAVLMVESEAKELTEDQMLGAVLFAHDEFQVVINAVKELAAEAAKPTWNWAPAPEA
TELLGAIRAEFGEAISQAYTITIKADRYARLGELKDQVVAKLSGEEGQPSAAEVKAAFGE
IEYRTVRENIVNGKPRIDGRDTKTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVSAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSANAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKDAAEAARQRVLSITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaaaaaattccagttcggtcaatcgagcgttaccctcgagacaggc
cgtatcgcccgtcaggcctccggcgcagtattggtcaccgttgacgacgacgtcagcgtg
ttggtgactgttgtcggtgcaaagcaagccgatccgggcaagggtttcttccctctgtcc
gtgcactaccaggaaaagacttacgctgccggtaagatccctggcggtttcttcaagcgt
gaaggccgtccttccgagaaagaaaccctgacttcccgactgatcgaccgtccgatccgt
ccgctgttcccagaaggcttcatgaacgaagtgcaggttgtctgcaccgtcgtttccacc
agcaagaagaccgatccggacatcgctgcgatgatcggtacctcggctgccctggccatt
tccggcattccattcgacggcccgatcggcgccgctcgcgtggctttccacgaaagcacc
ggctacctgctgaacccgacttacgagcagcaggccgcttcgagcctggacatggtcgtt
gccggtacttccgacgccgtgctgatggttgaatcggaagccaaagagctgaccgaagac
cagatgctaggcgcggtactgttcgctcacgacgaattccaggttgtgatcaacgctgtt
aaagaactggctgccgaagctgccaagccaacctggaactgggctcctgcgccagaagcc
accgaactgctgggcgctatccgtgccgagttcggcgaagcgatctcccaggcttacacc
atcaccatcaaggccgaccgttacgctcgcctgggtgagctgaaggaccaagtggtcgcc
aagctgtccggtgaagaaggccagccaagcgctgctgaagtcaaagcggccttcggcgaa
atcgaataccgcaccgttcgcgaaaacatcgttaacggcaagccacgtatcgacggtcgc
gacaccaagactgtacgtccgctgaacatcgaagtcggcgtcctgccaaagactcacggt
tcggctctgttcacccgtggcgagacccaggcactggttgttgcaacactgggcaccgcc
cgtgatgcgcaactgctggacaccctggaaggcgaaaagaaagacccgttcatgctgcac
tacaacttcccgccgttctcggtaggcgagtgtggtcgcatgggtggcgccggtcgtcgc
gaaatcggtcacggccgtctggcccgtcgttcggtttcggccatgctgccagccgctgac
gtgttcccgtacaccatccgcgtggtatcggaaatcaccgaatccaacggttcgagctcg
atggcttccgtgtgcggtgcttccctggcactgatggacgctggtgtaccgatgaaggca
ccggtagccggtatcgccatgggtctggttaaagaaggcgagaagttcgccgtcctgacc
gacatcctcggcgacgaagatcacctgggcgacatggacttcaaggtagccggtaccgcc
aaaggcgttactgcgctgcagatggacatcaagatcaagggcatcaccgaagagatcatg
gaaatcgctctgggccaggcccttgaagcgcgcctgaacatcctcggccagatgaaccag
atcattggccagtcgcgtaccgaactgtcggccaacgctccgaccatgatcgcgatgaag
atcgacaccgacaagatccgtgacgttatcggtaaaggtggcgcgaccatccgtgcgatc
tgcgaagaaaccaaggcttcgatcgacatcgaagacgatggctcgatcaagatcttcggc
gaaaccaaggatgccgcagaagcagcgcgtcagcgcgttctgagcatcacggcagaagcc
gagatcggcaagatctacgtcggcaaggttgagcgcatcgtcgacttcggcgcattcgtc
aacatcctgccgggcaaggacggtctggtgcacatctcgatgctgagcgacgctcgcgtt
gagaaagtgaccgacatcctgaaagaaggccaggaagtggaagtgctggtattggacgtg
gacaaccgcggccgtatcaagctgtccatcaaagacgtggcagctgccaaggcttcgggc
gtttaa
DBGET
integrated database retrieval system
