Pseudomonas koreensis: AYO71_07595
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Entry
AYO71_07595 CDS
T04647
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pkr
Pseudomonas koreensis
Pathway
pkr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AYO71_07595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkr03019
]
AYO71_07595
Enzymes [BR:
pkr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AYO71_07595
Messenger RNA biogenesis [BR:
pkr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AYO71_07595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AMT87410
LinkDB
All DBs
Position
complement(1748342..1749820)
Genome browser
AA seq
492 aa
AA seq
DB search
MTVLKALKKMFGKSEAEQLAPVPSAPSHALGHRTDAPQADRPAPAAAPKPEEKPAAAAPM
AVEPAPGEAPKPARPRREPKPKAPVIPWKLEDFVVEPQEGKTRFHDFKLAPELMHAIQDL
GFPYCTPIQAQVLGFTLAGKDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRA
LIIAPTRELVVQIAKDAADLTKYTGLNVMTFVGGMDFDKQLKHLEARHCDILVATPGRLL
DFNQRGDVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTEDVM
NLAKQWTTDPAIVEIEITNVANENVEQHIYAVAAADKYKLLYNLVNDNGWERVIVFANRK
DEVRRIEERLVRDGINAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRGIHIDGIS
HVINFTLPEVPDDYVHRIGRTGRAGADGVSISFAGEDDSYQLPSIEEKLGRKISCETPPT
HLLRAVERKRPQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgctcaaagcactcaagaaaatgttcggtaaaagcgaggctgagcagctcgcg
ccagttcccagtgcgccgtcgcacgccctcggtcatcgcaccgatgccccgcaggccgac
cgccccgctcccgcagccgcaccgaagcccgaagaaaaacccgctgcggccgcgccaatg
gccgtagagcctgcacccggcgaagcgccgaaaccggccagaccgcgtcgagaaccgaag
cccaaggcaccggtcatcccatggaagctcgaagacttcgtcgtcgaaccccaggaaggc
aaaacccgctttcacgatttcaagcttgctccggaactgatgcacgccatccaggacctg
ggctttccttactgcacgccgatccaggcgcaggtgctgggcttcaccctcgccggcaaa
gacgccatcggccgcgcgcagaccggcaccggcaagaccgccgcgttcctgatctcgatc
atcacccagttgctgcagacgccgccgccgaaagagcgctacatgggcgaaccgcgcgcg
ctgatcatcgcgccgacccgcgagctggtggtgcagatcgccaaggacgccgctgacctg
accaagtacaccggcctcaacgtcatgacgttcgtcggtggtatggatttcgacaaacag
ctcaagcacctcgaagcgcggcattgcgacatcctcgtcgccacgccgggccgcttgctc
gacttcaaccagcgcggcgatgtgcacctggacatggtcgaagtgatggttctggacgaa
gccgaccgcatgctcgacatgggtttcatcccgcaggtacggcagatcattcgccagacc
ccgccgaagtccgagcgccagactttgctgttctccgcgaccttcaccgaagacgtgatg
aatctggccaagcaatggaccacagacccggcgattgtcgaaatcgaaatcaccaacgtc
gccaacgagaacgtcgagcagcacatctacgccgtggccgctgccgacaaatacaagctg
ctctacaacctggtcaacgataacggttgggagcgagtcatcgtgtttgccaaccgcaag
gacgaagtacgccgcatcgaagagcgtctggtgcgtgacggcatcaacgccgcgcaactc
tccggtgatgtgccgcagcacaagcgcatcaagactctggaaggcttccgcgaaggcaag
atccgcgtgctggtggccaccgatgtcgccggtcgcggcatccacatcgacggcatcagc
cacgtgatcaacttcaccctgccggaagtcccggacgattacgtgcaccgcattggccgt
accggtcgtgctggcgccgatggcgtgtcgatcagctttgccggcgaggacgactcttac
cagttgccgtcgatcgaagaaaagctaggtcgcaagatcagctgtgaaaccccgccgacg
catctgctgcgtgcggttgagcgcaagcgtccgcagtaa
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