Pseudomonas koreensis: AYO71_07720
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Entry
AYO71_07720 CDS
T04647
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pkr
Pseudomonas koreensis
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pkr03019
]
AYO71_07720 (rnc)
03009 Ribosome biogenesis [BR:
pkr03009
]
AYO71_07720 (rnc)
03036 Chromosome and associated proteins [BR:
pkr03036
]
AYO71_07720 (rnc)
Enzymes [BR:
pkr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
AYO71_07720 (rnc)
Messenger RNA biogenesis [BR:
pkr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AYO71_07720 (rnc)
Ribosome biogenesis [BR:
pkr03009
]
Eukaryotic type
90S particles
RNase
AYO71_07720 (rnc)
Prokaryotic type
rRNA processing factors
AYO71_07720 (rnc)
Chromosome and associated proteins [BR:
pkr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
AYO71_07720 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
AMT87435
LinkDB
All DBs
Position
1774706..1775395
Genome browser
AA seq
229 aa
AA seq
DB search
MSVSLSRLERQLGYTFKDQELMLLALTHRSFAGRNNERLEFLGDAILNFVAGEALFDRFP
LAREGQLSRLRARLVKGETLAVLARGFDLGDYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMDVARERVLAWLAGEFEGLTLVDTNKDPKTRLQEHLQSRGCELPRYEVVDIQG
EPHCRTFFVECEVVLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtttctctaagccgtctcgagcgccagctcggttacaccttcaaggatcaggag
ctgatgctgctggccctcacgcaccgcagttttgccgggcgcaacaacgagcgtctggaa
ttcctcggtgatgccatcctcaacttcgtcgctggcgaggcgctgttcgatcgcttcccg
ctggcccgcgaaggtcagttgtcgcgtttgcgcgcacggctggtaaaaggtgagacgctg
gccgtactggctcgcggtttcgacctcggtgattatctgcgcctgggttcaggtgaactg
aagagcggtggtttccgccgtgaatcgattctcgccgatgccctcgaagctctgatcggt
gcgatctacctcgatgccggcatggacgtcgcccgcgagcgcgtactggcgtggctggcc
ggcgaattcgaaggcctgacgctggtcgacaccaataaggatccgaaaacccgcttgcag
gaacacctgcaatcgcgcggttgcgaactgccacgctacgaagtggtggatattcagggc
gaaccgcactgccgtaccttcttcgtcgagtgcgaagtggtcttattgaatgaaaaaagc
cgaggtcagggtgtgagccgtcgtattgccgaacaggtagcggccgccgcagcactgatt
gccctgggcgtggagaatggcaatgactga
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