Pseudomonas koreensis: AYO71_07730
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Entry
AYO71_07730 CDS
T04647
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pkr
Pseudomonas koreensis
Pathway
pkr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AYO71_07730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkr03400
]
AYO71_07730
DNA repair and recombination proteins [BR:
pkr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AYO71_07730
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AYO71_07730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AMT87437
LinkDB
All DBs
Position
1776457..1777146
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AA seq
229 aa
AA seq
DB search
MSQNPPPAQPAYVLHSRAYRETSALVDFLTPQGRLRAVLRSARGKAGTLARPFVALEVEF
RGKGELKNVGRMESSGTSAWLNGEALFSGLYLNELLIRLLPAEDPHPAVFDHYAATLLAL
AEGRPLEPLLRSFEWRLLDDLGYGFSMNTDIHGEPVAADGLYRLQVDAGLERVYLLQPGL
FNGTELLAMAEADWSAPGALSAAKRLMRQALAVHLGGRPLVSRELFRKP
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaaacccgcctcccgcccaacccgcctatgtcctgcattcgcgcgcctatcgc
gaaaccagcgcactggtcgatttcctcacgccgcaaggtcggctgcgggcggtgttgcgc
agtgcgcggggcaaggccgggacgctggcgcggccgttcgtggcgctggaggtcgagttt
cgtggcaagggcgagctgaagaatgtcgggcgcatggagagttctggcacctctgcgtgg
ctcaacggcgaggcgctgttcagcggcctctatctcaacgagctgttgattcggctgttg
cctgccgaagatccgcatccggcggtgttcgatcattacgccgcgaccttgctggcgctg
gccgaaggtcgaccactggaaccgttgctgcgctccttcgaatggcgattgctggatgat
ctcggctacggcttctcgatgaacactgacatccacggtgagcccgtcgctgctgacggt
ctctatcgcctgcaagtcgatgccgggctcgaaagggtgtatctgctgcagccaggcctg
ttcaacggcactgaactgctggccatggccgaagccgactggtcggcgcccggtgcgctg
tcggcggccaagcgtctgatgcgccaggcgctggcggtgcatttgggcgggcgcccgctt
gtcagtcgcgagctgtttcgcaagccctga
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