Pseudomonas koreensis: AYO71_08380
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Entry
AYO71_08380 CDS
T04647
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pkr
Pseudomonas koreensis
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pkr03016
]
AYO71_08380
Enzymes [BR:
pkr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
AYO71_08380
Transfer RNA biogenesis [BR:
pkr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AYO71_08380
Prokaryotic type
AYO71_08380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
AEP-TOTE
Motif
Other DBs
NCBI-ProteinID:
AMT87560
LinkDB
All DBs
Position
1933297..1934355
Genome browser
AA seq
352 aa
AA seq
DB search
MNELQLLGPRAYGEPLGTAVLKAIAEDFQVDEVLDIPFSGDGEHLWIWVEKRGLNTEEAA
RRIAKAAGVPLRIVSYAGLKDRQALTRQWFSVQLPGKADPDLSAAENDTLKILKTTRHKR
KLQRGAHSANGFTLRLTQFNGDKDAIEQRLQLIAKQGIPNYFGAQRFGHDGGNVVDARAW
AARKALPEQRNVRSRLLSTARSFLFNQVLAARVADGTWNTALVGDLLAFTDSRSFFPAGE
AECSDPRLAILDLHPTGPQWGEGDSPTAGAVHELEQAIAAREADLRDWLIHAGMSHERRI
LRLPIGGLTWHYPQPDILQLEFVLPAGCFATVLVRELVDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaactgcaattactcggcccacgggcctatggcgaacccctcggcacagcggta
ctgaaagccatcgccgaagatttccaggtcgatgaagtgctggatattccgttcagcggt
gacggcgaacacctgtggatctgggtggaaaagcgcggcctcaataccgaagaagcggcg
cggcgtatcgccaaggcagccggcgtgccgttgcgtatcgtcagctatgccgggctgaag
gaccgtcaggccctgacccgacagtggttcagcgtgcagttgccgggcaaggccgatccg
gatctgtcggcggcggaaaacgacacgctgaagatcctcaagaccacgcgccacaagcgc
aagctgcaacgcggtgcgcattcggccaatggcttcaccctgcgcctgacgcaattcaat
ggcgacaaagatgcgattgaacagcggctgcaactgatcgccaaacaaggcatccccaat
tatttcggcgcccagcgcttcggccatgacggcggcaacgttgtcgatgcccgggcgtgg
gcggcgcgcaaggctttgccggaacagcgcaatgtgcgttcgcggttgctatcgacggcg
cgcagctttctgttcaaccaggtgctggcggcgcgcgtcgccgatggcacctggaacacc
gcactggtgggcgatctgttggcctttactgacagccgcagctttttcccggccggcgaa
gccgaatgcagcgacccgcgtctggcgattctcgacctgcacccgaccggtccgcagtgg
ggcgaaggtgactcgcccaccgctggcgcagtccatgaactggagcaggcgatcgccgcc
cgcgaagcggatctgcgcgactggttgatccacgccggcatgagccatgaacgtcgcatc
ctgcggctgcccattggcgggttgacgtggcattatccccaacctgacattctgcaactg
gaattcgtcctcccggccggatgctttgccaccgtattggtgcgcgagctcgttgatctg
gtgccggtggggcagacggacagcccatgcgtattctga
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