Pseudomonas koreensis: AYO71_08400
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Entry
AYO71_08400 CDS
T04647
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
pkr
Pseudomonas koreensis
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pkr03021
]
AYO71_08400
Transcription machinery [BR:
pkr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AYO71_08400
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
KinB_sensor
Motif
Other DBs
NCBI-ProteinID:
AMT87564
UniProt:
A0A142N5H0
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All DBs
Position
1936954..1937961
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AA seq
335 aa
AA seq
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MALSKEVPEFDIDDEVLLMETGIDSDSMLNDEGAAPPSVRSKSRHSATLKQHKYIDYTRA
LDATQLYLNEIGFSPLLSPEEEVHFARLSQSGDPAGRKRMIESNLRLVVKIARRYVNRGL
SLLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKE
LNVYLRAARELTQKLDHEPSPEEIANLLEKPVGEVKRMLGLNERVSSVDVSLGPDSDKTL
LDTLTDDRPTDPCELLQDDDLSQSIDQWLSELTDKQREVVIRRFGLRGHESSTLEDVGLE
IGLTRERVRQIQVEGLKRLREILEKNGLSSESLFQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggctctcagtaaagaagtgccggagtttgacatcgacgatgaggttctccttatggag
accggcatcgattcggattcgatgttgaatgatgaaggggctgctccaccttccgttcgt
tccaaatccagacactccgccacactcaaacaacataaatacatcgactacactcgggca
cttgatgccacgcagctgtatctcaacgaaatcggcttttcccctctgctctccccggaa
gaagaagttcattttgcgcgcttgtcgcaaagtggcgatcctgccgggcgcaagcgcatg
atcgaaagtaacctgcggctggtcgtcaagatcgcccggcgttacgtcaatcgggggctg
tcgctgctggatctgatcgaagagggcaacctcggcctgatccgcgcggtggaaaagttc
gatcccgagcgcggcttccgcttctcgacctacgcgacctggtggatccgtcagaccatc
gaacgcgcgatcatgaatcagacccggaccatccggctgccgatacatgtggtcaaggag
ctcaacgtctacctgcgcgccgcacgtgagctgacgcaaaaactcgaccacgaaccttca
cccgaagaaatcgccaacctgctggagaaaccggtgggggaggtcaagcgcatgctgggc
ctcaacgaaagggtttcttcggtcgacgtctcgctgggtccggattcggataaaaccctg
ctggacacactcactgacgatcgtccgaccgatccgtgcgaactgctgcaggacgatgac
ctgtcgcagagcatcgatcaatggctgtcggagctgaccgacaagcagcgcgaggtggtg
attcgccgcttcgggctgcgtggtcacgaaagcagcacgctggaagatgtcggcctggag
atcggtctgacccgcgagcgggtacggcagatccaggtggaagggctcaagcgccttcgc
gagatccttgaaaagaacggcctgtcgagcgagtcgctgtttcaataa
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