Pseudomonas koreensis: AYO71_08410
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Entry
AYO71_08410 CDS
T04647
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
pkr
Pseudomonas koreensis
Pathway
pkr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AYO71_08410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkr03400
]
AYO71_08410
DNA repair and recombination proteins [BR:
pkr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
AYO71_08410
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Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
MutS_C
Motif
Other DBs
NCBI-ProteinID:
AMT87566
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Position
complement(1938977..1941559)
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AA seq
860 aa
AA seq
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MNKAVSDLSSHTPMMQQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARG
QSAGQAIPMCGIPYHAAEGYLAKLVKLGESVVICEQVGDPATSKGPVERQVVRIITPGTV
SDEALLDERRDNLIAAVLGDERLFGLAVLDITSGNFTVLEIKGWENLLAELERVNPVELL
IPDDWPKDLPAEKRRGVRRRAPWDFERDSALKSLCQQFSTQDLKGFGCENLTLAIGAAGC
LLAYAKETQRTALPHLRSLRHERLDDTVVLDGASRRNLELDTNLAGGRDNTLQSVVDRCQ
TAMGSRLLTRWLNRPLRDLTVLLARQTSIRCLLDGYRFEKLQPQLKEIGDIERILARIGL
RNARPRDLARLRDALGALPELQVAMTDLEAPHLQHLAATTSTYPELAALLAKAILDNPPA
VIRDGGVLKTGYDSELDELQSLSENAGQFLIDLEAREKARTGLANLKVGYNRIHGYFIEL
PSKQAESAPADYIRRQTLKGAERFITPELKEFEDKALSAKSRALAREKMLYEALLEDLIS
QLPPLQDTAGALAELDVLSNLAERALNLDLNCPRFVSEPCMRITQGRHPVVEQVLTTPFV
ANDLSLDDNTRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRI
GSSDDLAGGRSTFMVEMSETANILHNATERSLVLMDEVGRGTSTFDGLSLAWAAAERLAH
LRAYTLFATHYFELTVLPEAEPLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQL
AGVPSEVILRAREHLSRLEDTALPHEAPKPAAKGKPSTPQQSDMFASLPHPVLDELAKVD
LDDMTPRRALEMLYALKNRI
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagccgtctccgacctgtcctcccacactccgatgatgcagcaatactggcgc
ctgaagaatcagcacccggaccagctgatgttctatcgcatgggcgatttctacgaaatc
ttctacgaagatgcgaagaaagccgccaagttgctggacatcaccctgaccgcgcgcggg
cagtcggcgggccaggcgattccgatgtgtgggattccttaccatgcggcggaaggttac
ctggcgaaactggtcaagctcggcgaatcggtagtgatttgcgagcaggtcggcgacccg
gccaccagcaaaggcccggtggagcgccaggtcgtacggatcatcacgccggggacagtc
agtgacgaggcgctgctggacgaacgccgcgataacctgatcgcagcggtgttgggcgac
gagcgtctattcggtctggcggtgctggacatcaccagcggcaacttcaccgtgctcgag
atcaaaggctgggaaaacctgctcgccgaactggagcgggtcaacccggtggaattgctg
attcctgatgactggccgaaagacttgccggcggaaaaacgccgtggcgtacgccgtcgc
gcgccgtgggatttcgagcgtgactcggcgctgaaaagtctctgtcagcaattttccact
caagacctgaaaggcttcggctgcgagaacctgaccctggccattggcgctgccggttgc
ctgttggcctacgccaaggaaacccagcgcaccgccctgccccatttgcgtagcctgcgt
cacgagcgtctcgacgacaccgtggtgctcgacggcgccagccggcgcaatctggaactc
gacaccaacctcgccggtggccgcgacaacacactgcaatcggtggtcgatcgctgccag
accgccatgggcagccgtttactgacccgctggctgaaccggccgttgcgcgacctcacc
gtgctgctggcacgccagacgtcgatccgctgcctgctcgacggctaccgcttcgaaaag
ctgcaaccgcagctcaaggaaatcggcgatatcgagcggatcctggcgcgtatcggtctg
cgcaatgcgcgaccacgtgaccttgcgcgtctgcgcgatgcactcggcgcactgcccgaa
ctgcaagtggcgatgaccgatctggaagcgccgcacctgcagcatctggcggccaccacc
agcacttacccggaactggcggcgctgctggcaaaagccattctcgacaacccgcctgcg
gtgatccgcgacggcggtgtgctgaaaactggttacgacagtgagctcgatgaactgcaa
tcactgagcgaaaacgccggccagttcctcatcgatctcgaagcccgggagaaagcccgt
actggtctggccaacctcaaagtcggctacaaccgtatccacggctacttcatcgaactg
ccgagcaagcaggccgaatcggcgccggctgactatatccgccggcagacgctcaaaggc
gccgagcgcttcatcacacctgagctgaaagaattcgaagacaaggcactttccgccaag
agccgcgcgctggcccgggaaaaaatgctttacgaggcgctgctcgaagacttgatcagc
cagctgccaccgctgcaggacaccgccggcgcattggccgaactggatgtgctgagcaac
cttgccgagcgtgcgctgaatctcgacctcaattgcccgcgtttcgtcagcgagccgtgc
atgcgcatcacccagggtcgtcaccctgtggtcgagcaagtgctgaccacgccgttcgtg
gccaacgatctgagcctggatgacaatacgcgcatgctggtcatcaccggtccgaacatg
ggcggtaaatccacttacatgcggcaaaccgcgttgatcgtgttgctagcgcatattggc
agtttcgtgccggccgccagttgcgagttgtcgctggtcgaccgcatcttcacccgtatc
ggctcaagcgatgatctggccggcggtcgctcgaccttcatggtcgagatgagcgaaacc
gccaacatcctgcataacgccaccgagcgcagtctggtcctgatggacgaagtcgggcgc
ggtaccagcacctttgacggtctgtcgctggcgtgggcagcggccgagcgcttggctcat
ctgcgtgcctacaccctgttcgccacgcactattttgaactgaccgtgctgccggaagcc
gaacctcttgtagctaacgtgcacctcaacgctaccgagcacaacgaacggatcgtgttc
ctgcaccacgttctgcctgggcctgccagccagagttatggcttggcggtggcacaactg
gccggcgtgccgagcgaggtgattctgcgagcgcgagagcatctgagtcgcctggaagac
accgccctgccccacgaagcgccgaaaccggcggccaagggcaagccgtcgacaccgcag
caaagcgacatgttcgcctcactgccacatccggtgctggacgaattggcgaaagtggat
ctggacgacatgacgccacgtcgagcgctggaaatgctctatgcactgaagaaccggata
taa
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