Pseudomonas koreensis: AYO71_09410
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Entry
AYO71_09410 CDS
T04647
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pkr
Pseudomonas koreensis
Pathway
pkr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AYO71_09410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkr03400
]
AYO71_09410
Enzymes [BR:
pkr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AYO71_09410
DNA repair and recombination proteins [BR:
pkr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AYO71_09410
Prokaryotic type
AYO71_09410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AMT87756
LinkDB
All DBs
Position
2145061..2145753
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AA seq
230 aa
AA seq
DB search
MTADDRIKLEPSWKEALRAEFDQPYMAELRSFLQQERAAGKEIYPPGPMIFNALNSTPLD
KVKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIYKELKRDLNIDIPNHGYLQSWA
EQGVLLLNTTMTVERANANAHKDKGWQHFTDRIIEVVSERQPHLVFMLWGAHAQSKQKLI
DATKHLVLTSVHPSPLSAYRGFLGCGHFSRTNKFLEQNGETPIDWRLPPI
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgacgaccgtatcaaactcgaaccgagctggaaggaggcactgcgtgctgag
ttcgaccagccttacatggcagagttgcgcagctttctgcagcaggagcgggccgccggc
aaggagatctacccgccgggaccgatgattttcaacgcactgaactcaacgccgctggac
aaggtgaaagtggtgatcctcggccaggacccgtaccacggcccgggccaggcccacggt
ctgtgcttctcggtgcaaccgggcgtgccggcgccgccgtcgctggtcaatatctataaa
gagctgaagcgcgacctcaatatcgacattcccaaccacggctacctgcagagctgggcc
gaacagggcgtgctgctgctcaacaccaccatgacggttgagcgcgccaacgccaacgcg
cacaaggacaagggctggcagcacttcaccgaccgcatcattgaggtggtcagcgagcgg
cagccgcatctggtgttcatgctttggggcgcccatgcgcagagcaagcagaagctgatc
gacgcgaccaagcacctggtgctgacctcggtgcatccgtcgccgttgtcggcgtatcgc
gggtttttgggctgtgggcatttcagccggaccaacaagtttctcgaacagaatggcgaa
acgcctatcgactggcgcttgccaccgatttga
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