Pseudomonas koreensis: AYO71_11970
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Entry
AYO71_11970 CDS
T04647
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pkr
Pseudomonas koreensis
Pathway
pkr03030
DNA replication
pkr03430
Mismatch repair
pkr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AYO71_11970
03430 Mismatch repair
AYO71_11970
03440 Homologous recombination
AYO71_11970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkr03032
]
AYO71_11970
03400 DNA repair and recombination proteins [BR:
pkr03400
]
AYO71_11970
Enzymes [BR:
pkr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AYO71_11970
DNA replication proteins [BR:
pkr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AYO71_11970
DNA repair and recombination proteins [BR:
pkr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AYO71_11970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
ResIII
AAA_14
AAA_18
TIP49
AAA_30
AAA_2
AAA_19
PIF1
TsaE
HasA
nSTAND3
AAA_7
Rad17
Mg_chelatase
zf-CXXC
SKI
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AMT88230
LinkDB
All DBs
Position
2701617..2703713
Genome browser
AA seq
698 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSSPCGECSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP
ERVVEHLTHVLTAENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVLATDVRAM
LGTLDHGQVYDVLHALIEGDAKALLEAVRHLAEQGPDWNGVLSEILNVLHRVAIAQALPE
GVDNGHGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADTADAPRQPLKPVGISQATVDSANSVAAAPKPAPVVAAAAAAAAAPAPAPAPVAAPAAE
PEPVVPVVEAHPEPEPVAVETVVDLPWNDPVEAEAEPAPVQQPAVEPVLETAGEQPELPP
MPLPTPDSVVPDAPEWAAAPIPEPSVAEVDAATPGMDMDDEPPLDEDYIEPDMDSAYSYL
DELASEHAADPEPEPEPEPAAAPATGLALQWLELFPKLPISGMTGSIAANCTLIAVDGDH
WLMHLDPAHSALFNATQQRRLNDALNQFHGRTLTLTIELIKPEQETPAQAASRRRANRQR
EAEESIHGDPFIQQMVQQFGAVVRSDTIEPVDALVTQG
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctcaaggctctgatcaatgccttggacagccaacggctgcaccacgct
tacctgttcaccgggacgcgcggggtcggcaagaccaccatcgcgcggatcattgccaag
tgcctgaactgcgagacaggtatcacttccagcccctgcggcgagtgttcggtgtgccgc
gagatcgatgaaggccgttttgtcgacctgatcgagatcgacgctgccagccgcaccaag
gtcgaagacacccgcgaactgctcgataacgtgcagtacgcgccaagccgtgggcgcttc
aaggtctacctgatcgacgaagtgcacatgctttccagccattccttcaatgcgctgttg
aaaaccctcgaagagccgccgccctacgtcaagttcatcctggcgaccaccgatccgcag
aaacttccggcaacgattctttcgcgctgcctgcagttttccctgaagaacatgacgccc
gagcgtgtggtcgagcatttgacccacgtcctgaccgcagaaaacgtacctttcgaagac
gacgcactgtggctgctcggccgcgctgctgacggctcgatgcgcgacgccatgagcctg
accgatcaggccatcgcgttcggtgaaggcaaggtcctcgcgaccgacgtgcgcgcgatg
ctcggcacgctggatcacggtcaggtctatgacgtgctgcatgcgctgatcgaaggcgat
gccaaggcgctgctcgaagccgtgcggcatctggccgagcaaggcccggactggaacggc
gtgctctcggaaattctcaacgtgctgcaccgcgtggccatcgctcaggcgctgccggaa
ggcgtcgacaatggccacggcgaccgtgatcgcgtattggccctggcccaggcgttgccg
gccgaagacgtgcagttctattaccagatgggcctgatcggtcgtcgcgatttgccgctg
gcgccggacccgcgcggcggtttcgagatggtcttgctgcggatgctcgcgttccgcccg
gcggatacggcggacgcgccgaggcaaccgctaaagccagtggggatcagccaggccaca
gttgattccgcaaactcagtggctgccgcgcccaagcctgcgccggtggtcgctgcggct
gcggctgcggctgctgcgccagcacccgcgcccgcaccagtagcagcgccggctgccgag
ccagaaccggttgtgccggttgtcgaagcgcacccggagcctgagccagtcgccgtcgaa
accgtggtcgatctgccatggaacgacccggtggaagccgaggccgagccggcgccagtt
cagcaacccgccgtcgaaccggtgctggaaaccgccggcgagcagcctgaattgccgccg
atgccgctgccgaccccggacagcgtggtcccggatgcgccggagtgggccgctgcgccg
attcccgagccttccgtcgccgaggtcgatgccgctacgccgggcatggacatggacgac
gaaccgccgctggatgaagactacatcgagccggacatggattcggcctacagctacctc
gacgaactggccagcgaacacgccgccgatcccgagcctgagcccgagccggaacctgcc
gccgcgccggccaccggcctggccctgcaatggctggagctgttcccgaagctgccgatt
tccggcatgaccggcagcatcgccgccaactgcacgttgattgcggtcgacggcgatcat
tggttgatgcacctcgatccggcccacagcgcgctgttcaacgccacgcaacagcgtcgt
ctcaacgacgcgttgaaccagttccacgggcgcacgctgacgctgaccatcgagctgatc
aagcccgagcaggaaaccccggcccaggccgcctcccgccgccgcgccaatcgccagcgc
gaggccgaggaatcgatccacggtgatccgttcatccagcagatggttcagcagttcggc
gcggtggtgcgaagcgatactattgaacctgtcgacgccttggtcacccaaggctaa
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