Pseudomonas koreensis: AYO71_12440
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Entry
AYO71_12440 CDS
T04647
Name
(GenBank) tRNA pseudouridine(38,39,40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pkr
Pseudomonas koreensis
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pkr03016
]
AYO71_12440
Enzymes [BR:
pkr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AYO71_12440
Transfer RNA biogenesis [BR:
pkr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AYO71_12440
Prokaryotic type
AYO71_12440
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Ortholog
Paralog
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GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AMT88316
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All DBs
Position
2830663..2831487
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AA seq
274 aa
AA seq
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MAPDGFYRVALGVEYKGSRYSGWQRQLTGVATVQEELEKALSKVANSPVSLQCAGRTDAG
VHACGQVVHFDTQVDRSLKAWVMGANINLPHDISVSWARVMPAHFHARFKAIARRYRYVI
YNDQIRPAHLNEEITWNHRPLDAERMAEAAQYLIGTHDFSAFRAGQCQAKSPIKKMHHLR
VTRHGKMIVLDIRANAFLHHMVRNIAGVLMTIGAGERPVEWMKEVLESRERRSGGVTAHP
YGLYLVQVEYHDEFPLPERFIGPHFLTGFSELDG
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccgacggcttttaccgcgtcgcgctgggcgttgagtacaaaggctcgcgctac
agcggctggcaacggcagctgaccggagtggcgacggtgcaggaagagcttgaaaaagcc
ctgtcgaaagtcgccaattcgccggtttccctgcaatgcgccgggcgtaccgatgccggc
gtgcatgcctgcggccaagtggtgcactttgacacccaggttgatcgctcgctgaaagcc
tgggtcatgggcgccaacatcaatctgccccacgacatcagcgtcagttgggccagggtc
atgccggcgcattttcatgcgcgcttcaaagccattgcccggcgttatcgctatgtgatc
tacaacgatcagatccgcccggcgcacctcaatgaagaaatcacctggaatcaccgtccg
ctcgacgccgagcgtatggccgaggccgcgcagtacctgattggtacccacgatttcagc
gcgttccgggccggtcagtgccaggcaaagtcgccgatcaagaagatgcatcacctgcgc
gtgacccgtcacggcaagatgatcgtgctcgacattcgggccaatgccttcctgcatcac
atggtgcgcaatatcgctggtgtgctgatgaccatcggtgccggtgagcgtccggtggag
tggatgaaggaagtgctggaaagtcgcgagcgtcgctccggcggggtcacggcgcatccc
tacgggttgtatctggtgcaggtcgagtaccacgacgaatttccgttgcccgagcgcttt
atcgggccacatttccttacgggtttctccgaacttgacggctga
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