Pseudomonas koreensis: AYO71_14590
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Entry
AYO71_14590 CDS
T04647
Name
(GenBank) protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pkr
Pseudomonas koreensis
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pkr03009
]
AYO71_14590
Ribosome biogenesis [BR:
pkr03009
]
Prokaryotic type
ribosomal protein modification factors
AYO71_14590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
AMT88713
LinkDB
All DBs
Position
3263657..3265861
Genome browser
AA seq
734 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCD
TRNIPTENIRLSQNNIVDPENRYNQIFKIQVELPADISDKDRQGILRSIDRCTVKKVVQT
GPEFIIEEVDNLDADAQALLMPQSDSQAGTYIAGKDLPLEQTIANMSKILADLGMKIEIA
SWRNIVPNVWSLHIRDAHSPMCFTNGKGATKEGALASALGEFIERLNCNFFYNDQFWGED
IANAEFVHYPDEKWFKPGPKDELPSEILDDYTLGIYNRDGELRGSHLYDTNSGNTQRGIC
SLPFVRQSDGEVVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEM
ALPDVPQEVLEKYPSILAGIKGLEEQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASF
GAHPSLEVALERSLTELLQGRSFEGLNDLPQPTFSGQAVTEPNNFVEHFIDSSGVVSWRF
FSAKPDFEFVEWDFSGQGENSNAEEAATLFGILEDMGKEVYMAVYEHIGAKACRILVPDY
SEIYPIEDLIWDNTNKALQFRADILNLHNLSKVGLRNLVQGLERSEQDDYTDITTLIGIE
FDDNTPWGKLTILELRLLIYLALQKFDEAKDLVEAFLQYNDNTVERGLFYQAVNVVLEME
LDEDLELEDYEANFRRMFGDERMDAAIGSVNGSVRFYGLTPTSMKLEGLDRHLRLIESYK
KLHAARANGTTLSR
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaactttctcgacaaccttcgacttgaagccaagttcgacgacttc
acggtgatcgccgatcagccaattcgctacaagggtgatggttcggcaccggggccgttc
gactacttcctggcgtcgtcggccttgtgcgcggcttacttcgtcaagctgtactgcgac
acgcgcaatattccgacagagaacattcgcctgtcgcagaacaacatcgtcgacccggaa
aaccgctacaaccagattttcaagattcaggtcgaattgcccgccgatatttcggacaag
gatcgccagggcatcctgcgttccatcgaccgttgcaccgtgaagaaagtggtgcagacc
ggccccgagttcatcatcgaagaagtcgacaacctcgacgccgatgcccaggccttgttg
atgcctcagtccgattcccaggcaggcacctacatcgccggcaaggacctgccgctggaa
cagaccattgccaacatgtcgaagatcctcgccgacctcggcatgaagatcgaaatcgcc
tcgtggcgcaacatcgtgcccaacgtctggtcgctgcacattcgcgacgcgcattcgccg
atgtgcttcaccaacggcaagggcgcgaccaaggaaggcgcactggcgtcggcgctgggc
gagttcatcgagcgcctcaattgcaacttcttctataacgaccagttctggggcgaagac
atcgccaatgccgaattcgtccattacccggacgagaagtggttcaagccgggtcctaag
gacgaattgccaagcgagattctcgacgactacaccctcggcatttacaaccgcgatggc
gaactgcgtggctcgcacctttacgacaccaattccggcaacacccagcgcggcatctgc
tcgctgccgttcgtgcgccagtcggacggtgaggtggtgtacttcccgtcgaacctgatc
gaaaacctctacctcagcaacggcatgagcgccggcaataccttggccgaagcgcaggtg
cagtgcctgtcggaaattttcgagcgcgcggtgaaacgcgaaatcctcgaaggcgaaatg
gccctgccggatgtaccgcaagaggtactggaaaaatacccgagcatcctcgccggcatc
aaaggccttgaagagcagggcttcccggtattggtcaaggacgcctcgctgggcggtgaa
ttcccggtgatgtgcgtgaccctgatgaatccgcgcactggcggcgtcttcgcttccttc
ggcgcgcacccgagcctggaagtcgcgctggaacgcagcctgaccgagctgctccagggc
cgcagcttcgaaggcctcaatgacttgccgcagccgacgttctcggggcaggcagtgacc
gaaccgaacaactttgtcgagcacttcatcgattccagcggtgtggtgtcgtggcgcttc
ttcagtgccaagccagacttcgaattcgtcgaatgggacttctcgggccaaggcgaaaac
tccaacgccgaagaagccgcgaccctgttcggcatcctcgaagacatgggcaaggaagtc
tacatggcggtctacgagcacatcggcgccaaggcctgccgcatcctcgtgccggattac
tcggagatctacccgatcgaagacctgatctgggacaacaccaacaaagccctgcaattc
cgcgccgacatccttaacctgcacaacctcagcaaagtcggcctgcgcaacctcgttcag
gggctggagcgcagcgagcaggacgattacaccgatatcaccacactgatcggcatcgag
ttcgatgacaacacgccgtggggcaagctgacgattctggaactgcgcctgctgatctac
ctcgcgctgcagaagtttgacgaggccaaggatctggttgaggcgttcctgcaatacaac
gacaacaccgttgagcgtggcttgttctatcaggctgtgaatgtggtgctggagatggag
ctggacgaggatctcgagctggaagactacgaggccaacttccgtcggatgtttggtgac
gagcgtatggatgctgcgattggttcggtgaatggcagtgtgcgtttttacggtttgacg
ccgacgagcatgaagctggaagggctggatcggcatttgcgcttgatcgaaagctataaa
aagctgcatgcggcgcgggcgaatgggacaaccttgtcgcgctga
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