Pseudomonas koreensis: AYO71_18090
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Entry
AYO71_18090 CDS
T04647
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pkr
Pseudomonas koreensis
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkr03400
]
AYO71_18090
DNA repair and recombination proteins [BR:
pkr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AYO71_18090
Archaeal homologous recombinant proteins
AYO71_18090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AMT89348
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All DBs
Position
4074063..4075307
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AA seq
414 aa
AA seq
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MRLFHTSDWHLGQNLHGQERDFEHACFLEWLLRQLHLAQPDVLLIAGDIFDTVNPPVKAQ
ERLYDFIVSAHEQQPLLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDA
ERLLLPLPNAQGEIAAWCLALPFLRPAEVTGAHLGDNYLRGIGQVHEWLIAAANAKRQAG
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPASLFGESISYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIGYQHQILDVVLDGETLVSVEPKLIPRSVNLQRIGPAPLAEILLQL
ADLPNIDLLAETQRQPWLEVRVRLDEPQPDLRHQVETALQGKAVRLVRIAAEYAGNRGVD
GSDDGSTLIELDQLTPQELFSRAWLDNYGSEVDDQTLKDFAELLQDVQLEGEQP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgttccacacctccgactggcaccttgggcaaaacctgcacggccaggagcgc
gatttcgagcacgcgtgttttctcgaatggctgctgcgccagttgcacttggcgcagccg
gatgtgctgctgattgccggcgatatcttcgatacggtcaatccgccggtcaaagctcag
gaacgcctttacgacttcatcgtcagcgctcacgaacagcagccgttgctgaccatcgtg
atgatcgccggcaaccatgattccggctcgcggatcgaactgccggcgccgttgatgcgg
cgtttgcgtactcacgcgttgggtcgggtgctgtggctggatgacgggcagctcgacgcc
gaacgtttgttgctgccgctgccgaatgcgcagggagaaatcgccgcgtggtgtctggcg
ctgccgttcttgcgcccggcggaagtcactggcgcgcatctgggtgacaactatctgcgc
ggcatcggtcaggtgcatgaatggctgatcgcggcggcgaatgccaagcgtcaggccggg
caggcgttgatcgctatcagccacgcgcacatggccgggggctcggtgtcggaggattcc
gagcgtagcctgatcatcggcaatgccgaagcgctgcccgccagcctgttcggcgaaagc
atcagttacgtcgccctcggccatttgcacaagccgcagaaggtcaacggcgaggagcgc
atccgctacagcggctcgccgattccgctgtcgttctccgaaatcggttatcagcatcag
attctcgatgtggtcctcgacggtgaaactctggtcagcgtcgagccgaaactgatcccg
cgctcggtcaatctgcagcgcatcggcccggcgccgctggccgagattctgctgcaactg
gccgacctgccgaacatcgatctgctcgccgaaacccagcgccagccctggctcgaagtg
cgcgtgcgcctggatgagccgcagccggatctgcgccatcaagtggaaaccgcactgcaa
ggcaaagccgtgcgtctggtgcgcatcgctgctgaatacgccggcaatcgcggcgtcgat
ggcagcgatgacggcagcacgttgatcgaactcgaccagctcaccccgcaggaattgttc
agccgcgcctggctcgacaattacggcagcgaggtcgacgaccagacgctcaaggacttc
gccgaactgctgcaggacgtgcaactggagggcgagcagccatga
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