Pseudomonas koreensis: AYO71_18095
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Entry
AYO71_18095 CDS
T04647
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pkr
Pseudomonas koreensis
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkr03400
]
AYO71_18095
DNA repair and recombination proteins [BR:
pkr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AYO71_18095
Archaeal homologous recombinant proteins
AYO71_18095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
nSTAND3
Vps5
MMR_HSR1
RsgA_GTPase
AAA_22
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AMT89349
LinkDB
All DBs
Position
4075304..4078945
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNTGRDAKVPDADGEIATGDPRTLLRRGTGEGYAEVDFVGVDGRRYRARWEANRAREKA
GGKLQASRQSLRDIDQDQLLASQKGEYKTQLEAALGLNFEQFTRAVLLAQSEFSAFLKAD
DNDRSELLEKLTDTALYTRLGRRAFDKTKEAREAHKLLQDQATGVTPLAPEARAELDERF
NTAQQQMKAQQAQLKQLEQQHGWLKDLRLLQEAQKAASEQLQAAQQQWQALAGERVKLTR
LEQLGPQRHLFARKAELDALLTPLATQIAAHTQQHAALGERQTQLAQNLDAAKVALSEAQ
QRQSENAPLLRQAFEEQSTLARLIKDTASSAEARQTAEQAFKDGQSAIQALQEKQAEVAE
RLQRIATELEQSAHLAPLSDAWSAYRDRLQQLMLIGNRLNKGQSELASLEQNAARSAEQL
ASHKQQLEVLFKEAGAEPDAVAEQIGLLGTLLQDNRKQLRAIEDLSRLWATQQDLDKRSG
ELQQRQLDAQQQRERLTQDGVKTKAELTVAEQTLSVTRELLERQRLARSASVEELRAQLQ
DDQPCPVCGSNEHPYHQPEALLQSLGRHDESEQANAQQVVDQLKEKLIELRGEVGGVIAQ
QKELLQQQEQLAAQQQALAPSLDAHPLAAQLFNQGADKRDAWLSRQTEQLNQSITQDEQR
QSALLTLQQDAARLSQQLRQAEVAHQQAAQQLSHQQHELNSDRQRLEDELSAFGPLLPAD
TLEALRLEPAATFMQLDRQIAERLTQLEQQKEELSEQQQRQQTLEKEQDRQQLRTQQLHS
AEQQFTALTEQQQSCQEKLAQLLGEHSSAEHWQQQLEHAVEQARSAETSTAEELQSVRTQ
LVQIAAELKAQQERLQALQAEDLALTGKIADWRASHPELDDGGLEDLLRFDDAQVAELRQ
TLQHNEKAIEQAQVLLQERDQRLLDHQARQDGNLDAEQLDSALAELQNQFAVSEQQCAEL
RAEQAEDQRRQNANQTLALQIADAYAEYQRWARLSALIGSATGDTFRKIAQAYNLDLLVH
HANAQLRQLVKRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSTLEVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcgccattcgtttgaagaacctggcctcgctggccggtccgttcgagatc
gatttcaccgccgaaccgctggccagcgccgggctgtttgcgatcaccggccccacaggc
gccggcaaaagcacgctgcttgatgcgttgtgtctggcgctgttcggcgccgtgccgcgc
ctgaacaacaccggtcgcgatgcgaaagtccccgacgctgacggtgaaatcgccactggt
gacccgcgcaccttgctgcggcgtggcacgggtgaaggctatgccgaagtggattttgtc
ggcgtcgatggccgccgctatcgcgcgcgctgggaagccaatcgtgctcgcgagaaggct
ggcggcaaactccaggccagtcggcagagcctgcgcgacatcgatcaggatcaactgctc
gccagccagaaaggcgaatacaaaacccagctggaagccgcgctgggccttaactttgaa
cagttcacccgcgcggtgctgctggcgcagagcgagttcagcgcgttcctcaaggctgac
gacaacgaccgcagtgaactgctggaaaaactcaccgacaccgcgctgtacacccgtctc
ggccgccgcgccttcgacaagaccaaagaagcccgcgaagcgcacaagctgctgcaggat
caggctaccggtgtgacgcctttggcgccggaagctcgcgccgaactcgacgagcgtttc
aacaccgcgcagcaacagatgaaggcgcaacaggcgcagctcaaacagcttgagcaacaa
cacggttggctgaaggacttgcgtctgttgcaagaggcgcaaaaggccgccagcgaacaa
ctgcaagccgcgcaacagcaatggcaggcactggccggcgagcgggtaaaactaacgcgt
ctggaacagcttggcccgcaacgccatctgttcgcgcgcaaggccgagcttgatgcgctg
ctgacgccactggcgacgcagattgccgcgcacacccaacaacacgccgcgttgggcgaa
cgccagacgcaactggcgcaaaacctcgacgcagcaaaagtcgccctgagcgaagcgcaa
cagcgccagagcgaaaacgcaccgttgctgcgtcaggcattcgaagagcaaagcaccctc
gcccgtctgatcaaggacactgccagcagcgccgaagcccgacaaaccgccgagcaagcg
ttcaaggatggccagagcgcgattcaggccttgcaggaaaaacaggctgaggtcgccgag
cgtttgcaacgcatcgccaccgagcttgagcagagtgcgcatctggcgccgttgagcgat
gcctggagcgcctatcgcgaccgtctgcaacagctgatgctgatcggcaaccgcttgaac
aaaggccagagcgaactggcgtccctcgaacagaacgccgcgcgcagtgctgagcaactg
gcctcgcacaagcaacaactggaagtgctgttcaaagaggctggcgccgagcccgatgcg
gtggccgaacagatcggcctgctcggcaccttgctgcaggacaaccgcaaacagctgcgc
gcaatcgaagacctgtcgcgcttgtgggcgactcagcaggatctcgacaagcgcagcggc
gagttgcaacaacgtcagctcgacgcgcagcagcaacgtgaacgtctgacccaggacggt
gtgaaaaccaaggccgaactgaccgtcgccgagcagaccctcagcgtcactcgcgagctg
cttgaacgtcagaggctggcgcgcagtgccagtgtcgaagagttgcgcgcgcagttgcag
gacgatcagccctgcccggtctgcggcagcaacgagcatccctatcaccagcccgaagcg
ctgttgcaaagccttggccgtcacgatgaaagcgaacaggccaacgcccagcaagtggtc
gatcagctcaaggaaaaactgatcgaactgcgcggcgaagtcggtggcgtgatcgcacaa
cagaaagaattgctccagcaacaggaacaactggcggcgcagcaacaagccctggcgccg
agcctcgacgcgcatccgctggccgcgcaactgttcaatcagggcgccgacaaacgcgac
gcctggctcagccgccagaccgagcagttgaaccagagcatcactcaggacgaacaacgc
caaagtgcgctgctcaccttgcaacaggacgctgcgcgcttatcgcagcaattgcgtcag
gctgaagtggcgcatcagcaagcggcgcaacagctgagccatcagcagcatgaactcaac
agtgatcgtcagcgccttgaggatgaactcagcgcgttcggcccgctgctgcccgccgac
acacttgaggccttgcgcctggagccggcggcaacgttcatgcagctggaccggcagatc
gccgagcgtttgacccagctcgaacagcaaaaggaagagctgagcgaacagcagcaacgc
cagcagacgttggagaaagaacaggatcgccaacagctgcgcactcagcagctgcacagt
gccgaacagcaattcacggcgttgaccgagcagcagcaaagctgtcaggaaaaactcgcg
cagttacttggcgagcacagcagcgccgagcattggcagcagcagttggaacacgccgtg
gaacaggcgcgcagcgccgaaaccagcaccgctgaagagctgcaaagcgtgcgcacgcaa
ctggtgcagatcgccgctgagctcaaggcccaacaggaacgcctgcaagcactgcaagct
gaagacctggcactcaccggcaagatcgctgattggcgcgccagccatccggaactggat
gacggcggcctcgaagacttgctgcgcttcgacgacgcgcaagtcgccgaactgcgccag
acccttcagcacaacgaaaaagccatcgaacaggcccaggtcttgttgcaagagcgcgat
cagcgcctgctcgatcaccaggcccggcaggacggcaatcttgacgcggaacagctggac
agcgccctcgccgagctgcaaaaccagttcgccgtcagcgagcagcagtgcgccgaactg
cgcgccgaacaggcggaagaccagcgccgacagaacgccaatcagacgttggccctgcag
atcgctgacgcctacgccgagtatcaacgctgggcgcgactcagtgccttgatcggctcg
gccaccggcgacaccttccgcaagatcgcccaggcctacaacctcgacctgctggtgcat
cacgccaacgcgcagctgcgccaactggtcaaacgctatcgcctcaaacgtggcggcagc
atgctcggcctgctggtgatggacacggaaatgggcgacgaactgcgctcggtgcattcg
ttgtcgggcggcgagacgttcctcgtctcgctcgcccttgcgctgggtctggcttcgatg
gcgtcgagcacgctgaaaatcgaatcgctgtttatcgatgaaggctttggcagcctagat
ccggaatccttgcaactggccatggacgcgctcgatggcttgcaggcgcagggacgcaag
gtggcggtgatttcccatgtgcaggaaatgcacgaacggatcccggtgcagattcaggtg
cggcgtcagggcaatggtttgagtacgctggaggtgaaatga
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