Pseudomonas koreensis: AYO71_21260
Help
Entry
AYO71_21260 CDS
T04647
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pkr
Pseudomonas koreensis
Pathway
pkr00071
Fatty acid degradation
pkr00280
Valine, leucine and isoleucine degradation
pkr00310
Lysine degradation
pkr00362
Benzoate degradation
pkr00380
Tryptophan metabolism
pkr00410
beta-Alanine metabolism
pkr00640
Propanoate metabolism
pkr00650
Butanoate metabolism
pkr00907
Pinene, camphor and geraniol degradation
pkr00930
Caprolactam degradation
pkr01100
Metabolic pathways
pkr01110
Biosynthesis of secondary metabolites
pkr01120
Microbial metabolism in diverse environments
pkr01200
Carbon metabolism
pkr01212
Fatty acid metabolism
Module
pkr_M00087
beta-Oxidation
pkr_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AYO71_21260 (fadB)
00650 Butanoate metabolism
AYO71_21260 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
AYO71_21260 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AYO71_21260 (fadB)
00310 Lysine degradation
AYO71_21260 (fadB)
00380 Tryptophan metabolism
AYO71_21260 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AYO71_21260 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AYO71_21260 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AYO71_21260 (fadB)
00930 Caprolactam degradation
AYO71_21260 (fadB)
Enzymes [BR:
pkr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AYO71_21260 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AYO71_21260 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AYO71_21260 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
AYO71_21260 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AMT89950
LinkDB
All DBs
Position
complement(4754954..4757101)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADYRVMSTKAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAIEWIAAGKENRPEDAL
KVSAVDAVVAPEKLQEAALELIKRAISGEFDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEDKVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAIATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFYAYEADKKGKQ
KKVADPSVLEVLKPIVYEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaagctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaactg
cgtcaggccgtagacaccatcaaggcagatgcttcgatcaagggcgtgatcgtcagcagc
ggcaaggacgtgttcatcgtcggcgccgacatcaccgaatttgtcgacaacttcaagctg
ccggatgccgagctggttgcaggcaatctcgaagccaacaagatcttcagcgatttcgaa
gacctcaacgtgccgaccgtcgcggccatcaacggcatcgccctcggtggcggtctggaa
atgtgcttggcggccgactatcgcgtcatgtccaccaaggccaagatcggtctgccggaa
gtcaaactgggcatctacccaggcttcggcggtactgtgcgtctgccacgcctgatcggt
gtcgacaacgccatcgagtggattgccgccggcaaggaaaaccgtcctgaagacgccctg
aaagtcagcgccgtcgacgccgtggttgctccagagaagctgcaggaagctgcccttgaa
ctgatcaagcgcgccatctccggcgagttcgattacaaagccaagcgtcagccgaaactt
gaaaaactcaagttgaacgccattgaacaaatgatggctttcgaaaccgccaaaggtttc
gtggctggccaggccggcccgaactacccggcgccggttgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgcgacaaagcactggaagttgaagctgcaggcttcgtcaaa
ctggccaagacctctgctgcgcagagcctgatcggcctgttcctgaacgatcaggaactg
aagaaaaaggccaaggcctacgacgaaatcgccaaggacgtgaagcaggctgccgtactc
ggcgccggcatcatggggggcggtatcgcctatcagtcggcttccaaaggcacgccgatc
ctgatgaaggacatcaacgagcacggtatcgagcagggtctggccgaagccgccaagctg
ctggtcggccgcgttgacaagggtcgcatgaccgctgcgaagatggctgaagtgctcaac
ggcattcgtccgaccctgtcctacggcgacttcggtcacgtcgatctggtcgtcgaagct
gtggtcgaaaacccgaaggtcaagcaagcggtactggctgaagtcgaagacaaggtcaaa
gaggacaccatcctcgcgtccaacacctcgaccatttccatcagcctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagtgaactggcgatcgccaccaccgttgcc
tacgcgaagaaaatgggcaagaacccgatcgtcgtcaatgactgcccgggctttttggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaagctggtcagcgccggtgtcgac
ttcgttcgcatcgacaaagtgatggaaaaattcggctggccaatgggcccggcttacctg
atggacgtggtcggcatcgacaccggtcaccacggtcgcgacgtcatggctgaaggtttc
ccggaccgcatgaaggatgaccgtcgttcggccatcgacgtgctgtacgaagccaagcgc
ctgggccagaagaacggcaagggcttctacgcctacgaagccgacaagaaaggcaagcag
aagaaagtcgccgatccgtcggtactcgaagtgctcaagccgatcgtttacgagcagcgc
gaagtcactgacgaagacatcatcaactggatgatgatcccgctgtgcctggaaaccgtg
cgctgcctggaagacggcatcgttgaaaccgccgccgaagccgacatgggtctggtctac
ggtatcggtttccctccattccgtggcggtgcgctgcgctacatcgattcgatcggtgtt
gccgagttcgttgccctggctgaccagtacgctgatttgggcgcgctgtaccacccgacc
gcgaagctgcgcgaaatggccaagaacggccagagcttcttcggttaa
DBGET
integrated database retrieval system
