Pseudomonas koreensis: AYO71_21485
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Entry
AYO71_21485 CDS
T04647
Name
(GenBank) DNA-binding response regulator
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
pkr
Pseudomonas koreensis
Pathway
pkr02020
Two-component system
pkr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AYO71_21485
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AYO71_21485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pkr02022
]
AYO71_21485
Two-component system [BR:
pkr02022
]
OmpR family
QseC-QseB (quorum sensing)
AYO71_21485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
AMT89988
LinkDB
All DBs
Position
complement(4802668..4803348)
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AA seq
226 aa
AA seq
DB search
MHVLVCEDDELIASGIVAGLTAQGLTVEHVNTASKARAMLKVAEFDVMVLDLGLPDEDGL
KLLQQLRQSGLEIPVLILTARDSVTDRVDGLQAGADDYLLKPFDLRELFARLQTLLRRVA
GRSVNLIEHGALTYDPSSRETRLAGQPVDLSRREQSLLQALLHNRGRVLSTEQLKDSVYG
FNDELESNALNVHIHHLRSKLGKGIVETVRGLGYRLGPADGAEQGK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtactggtttgcgaagacgacgagctgattgccagcggcatcgttgccgggctc
acggctcagggtctgaccgtcgagcacgtcaacaccgcgtccaaggcgcgggcgatgctc
aaggtcgccgaattcgatgtgatggtgctcgatctcggcctgccggacgaagatggcctc
aagttgctgcaacagttgcggcagagcggcctggaaattccggttctcatcctaactgcc
cgtgactcggtgaccgatcgtgtcgatggtctgcaggccggcgccgacgactatctgctc
aagcctttcgacctgcgcgaactgttcgctcgcctgcaaaccctgttgcgccgcgtggcc
gggcgcagtgtcaatctgatcgagcacggcgcgctgacctacgacccgagcagccgcgaa
acccgtctggccgggcaaccggtggacctgtcgcgccgtgagcagtcgctgttgcaggcg
ctgctgcacaatcgcggccgggtgctgtccaccgagcaactgaaggacagcgtctacggc
tttaacgacgaactggaaagcaacgcgctgaacgtgcatatccatcatctgcgcagcaag
cttggcaaaggcatcgttgaaaccgtgcgcggtctgggctatcgcctcgggcctgccgat
ggcgcagagcaaggcaaatga
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