Pseudomonas koreensis: AYO71_25560
Help
Entry
AYO71_25560 CDS
T04647
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pkr
Pseudomonas koreensis
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkr03400
]
AYO71_25560
Enzymes [BR:
pkr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AYO71_25560
DNA repair and recombination proteins [BR:
pkr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AYO71_25560
Prokaryotic type
AYO71_25560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AMT90762
LinkDB
All DBs
Position
5697663..5699108
Genome browser
AA seq
481 aa
AA seq
DB search
MQLIWLRSDLRLHDNTALAAAAARGPTVAVYLVSPQQWLEHDDAPCKVDFWLRNLRELSQ
SLGALNIPLLIRSAPHWDQAPAELLKLCRHLKIEAVHVNEEYGVHESRRDEAVAETLRAE
GIEFHSYLDQLLFKPGTVLTKTGTYFQVFSQFRKVCYERLHRSMPALVKAPGKQAAPDIA
SDAIPEAVKGFATPSESLRALWPAGEHEARRRLDTFTDAQIDYYRSERDFPAKPGTSQLS
AYLAAGVISPRQCLHAALQSNQGEFESGKVGAVTWINELLWREFYKHILVGYPRVSRHRA
FRPETEALAWRDAPEELKAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFNPLSQSEKFDAEGVFIK
HWLPELAGLNKKEVHNPAAAGGLFGVADYPAPIVNLSTSRERALTAFKNLPSRQPVGGSD
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgatctggctgcgcagcgacttgcgcctacatgacaacactgccctcgcggcc
gccgcagcgcgcggcccgaccgtggcggtgtatctggtgagtccgcagcaatggctggag
cacgacgatgcgccgtgcaaagtggatttctggctgcgcaacctgcgcgaactgagtcag
agcctcggcgcgctgaacatcccgttgttgattcgcagcgcaccgcactgggatcaggca
ccggcggagctgctcaaactctgccggcatttgaagatcgaggcggtgcacgtcaacgag
gaatacggcgttcacgaaagccgccgtgatgaagccgtggccgaaacgttgcgagccgaa
ggcatcgaattccacagttacctggatcagttgctgttcaaacccggcacagtgctgacc
aagaccggcacctacttccaggtgttcagtcagtttcgcaaagtctgctacgaacgcctg
catcgctcgatgccggcactggtcaaggcacccggcaagcaggccgcgccggatatcgcc
agcgatgcaattccggaggcggtaaaaggcttcgccacgccgagcgaatccctgcgcgcc
ctgtggccggccggcgagcatgaggcgcggcgccgcctcgacaccttcaccgatgcgcag
atcgactactaccgcagcgaacgcgatttcccggccaaacctggcaccagccaactgtcg
gcgtatctcgccgccggcgtgatctcgccacgccagtgcctgcacgctgcactgcaaagc
aatcagggcgagttcgaaagcggcaaggtcggcgcagtgacctggatcaacgagctgctg
tggcgcgagttctataaacacattctggtcggctacccacgtgtctcccggcatcgcgcc
tttcgcccggaaaccgaagcgctggcctggcgcgatgcgccggaagaactcaaggcctgg
caagaggcacgcactgggctgccgatcatcgacgcggcgatgcgtcaactgctggaaacc
ggctggatgcacaatcgcctgcgcatggtcgtggcgatgttcctgaccaaaaacctgctg
atcgactggcgcgagggcgaacgctttttcatgcgccacctgatcgacggcgacctggcg
gccaacaacggtggctggcaatggagctcatcgaccggcaccgactcagcgccctacttc
cgtattttcaacccgctgagccagtcggaaaaattcgatgccgaaggcgtgttcatcaag
cactggttgccggaactggccgggctcaacaagaaggaagtgcacaatccggcggcagct
ggaggactgttcggcgtggcagattatccggcgccgatcgttaatctcagcacttcacgc
gagcgtgcgctgacggcgttcaagaacctgccgtcgcgccagccagtgggcggcagcgat
gagtga
DBGET
integrated database retrieval system
