Pseudomonas koreensis: AYO71_26495
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Entry
AYO71_26495 CDS
T04647
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pkr
Pseudomonas koreensis
Pathway
pkr03030
DNA replication
pkr03430
Mismatch repair
pkr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AYO71_26495
03430 Mismatch repair
AYO71_26495
03440 Homologous recombination
AYO71_26495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkr03032
]
AYO71_26495
03400 DNA repair and recombination proteins [BR:
pkr03400
]
AYO71_26495
Enzymes [BR:
pkr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AYO71_26495
DNA replication proteins [BR:
pkr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AYO71_26495
DNA repair and recombination proteins [BR:
pkr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AYO71_26495
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF8678
RNase_H_2
Ribosomal_L26
Motif
Other DBs
NCBI-ProteinID:
AMT90933
LinkDB
All DBs
Position
complement(5894413..5895018)
Genome browser
AA seq
201 aa
AA seq
DB search
MERIAVIDFETTGLSPNSSCRATEIAVVMLENGRIVERYQSLMNAGVRVPAFIEQLTGIS
NAMLRTAPPAERVMEEVNEFVGCTPLLAHNASFDQKFWDFELGRIKRTRLQNFACSLLLA
RRLMPAAPNHKLGTLTTFAQLPHTGQAHRAMADAEMAANLMAHLAQELRGKHGVRELNHD
LLCKLQKVPAAKVGEHLQRYR
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgcattgcagtcatcgactttgaaaccaccggcctgtcgccgaacagcagctgc
cgcgctacggaaattgccgtggtcatgctggaaaacggccgcatcgtcgagcgttaccag
agcctgatgaacgccggcgtgcgcgtccctgcgttcatcgagcaactgaccggcatcagc
aacgccatgctgcgcaccgcgccgccggccgagcgggtgatggaagaggtcaacgaattc
gtcggctgcacgccgttgctggcgcacaacgcctcgttcgaccagaaattctgggatttc
gaactggggcggatcaagcgcacacgcctgcagaatttcgcctgttcactgctgctggcg
cggcgcctgatgccggcggcgccgaatcacaagctcggcacgctcaccacgttcgcgcag
ttgccgcatacgggccaggctcaccgggccatggccgatgcggagatggcggccaatctg
atggcgcatctggcgcaagagttgcgcggcaagcacggggtgcgcgagttgaatcacgac
ctgctgtgcaagttgcagaaagtccctgcggcgaaagtcggcgagcatttgcagcgttat
cgctga
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