Pseudomonas koreensis: AYO71_26795
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Entry
AYO71_26795 CDS
T04647
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pkr
Pseudomonas koreensis
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pkr03000
]
AYO71_26795
Transcription factors [BR:
pkr03000
]
Prokaryotic type
Helix-turn-helix
Other families
AYO71_26795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
AAA_5
PAS_4
HTH_23
HTH_50
HTH_30
AAA_2
HTH_7
HTH_AraC
AAA
PAS_8
HTH_20
PAS_9
PAS
HTH_22
Diguanyl_cycl_sensor
HVO_A0261_N
HTH_17
RWP-RK
Mg_chelatase
HTH_28
dnstrm_HI1420
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AMT90990
LinkDB
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Position
complement(5958510..5960405)
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AA seq
631 aa
AA seq
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MHDNHLSRHARQVLTVTQGKPHLHGPGADPSIARSWLRCLEDYHLDPSVTMAPTVLEHGR
VLESRERLQQVLQIAGTEMSSLHQQLSGAGHAVLLTDARGVILNCVTAPAERKIFERAGL
WLGADWSEACEGTNGIGTCLVERQALTIHQDEHFRGRHTGLTCSASPVFDPHGELLAVLD
VSSARPDVSRQSQFHTMALVNLSAKMIESCYFLRCFDNQWLLRFHLQAESVGLFSEGLLA
FDGEGRISAVNQSALNLLGHIRGGLLGKSVEAFFDCSLDDLLGRASANASASWPLRTRDG
RHLFAVLRGESRKPTAIVPTPITAPAPRLSGICLGDEALQAEFRKALRVFERDVPLLING
ETGSGKEAFAKAVHQASQRCGNAFVALNCAAIPESLIESELFGYRGGSFTGARKDGMRGK
LQQADGGTLFLDEIGDMPLALQTRLLRVLEDRQVVPIGGEPQAVDVRIISATHRNLLERV
EDGSFREDLYYRLNGLEVALPALRERSDKSQLLDFLLAEEAGGETILIDEAARQALLAFD
WPGNVRQLRNVLRTLAALCDGGRVGVEDLPVMIRQARPAVVAQPLEDAERLALLSALEQT
RWHMTRTAEQLGVSRNTLYRKLRKHGIARSA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacaaccatttgagtcgccatgcccgccaggttctcaccgtcacccagggcaaa
ccgcacctgcacggccccggcgccgatccatcgatcgcccgttcgtggctgcgctgcctt
gaggattatcacctcgatccttccgtgaccatggcgccgaccgtgctcgagcatggccga
gtgctggaaagtcgcgaacgtctgcagcaagtgctgcaaatcgccggcaccgagatgagc
agcctgcatcagcagctctccggggccggccatgcggtgctgctgactgacgcgcgcggt
gtgatcctcaattgcgtcaccgcgccggccgaacggaagattttcgaacgtgccgggctc
tggctaggtgctgactggagcgaagcctgcgaaggcaccaacggcatcggtacctgcctg
gtcgagcgtcaggcgctgaccattcaccaggacgaacactttcgcggccgccacaccggg
ctgacctgctcggcgagcccggtgttcgatccgcacggagaattgctggcggtactcgac
gtgtcctcggcgcggccggacgtttcacggcaaagtcagttccacaccatggcgctggtc
aatctgtcggcgaagatgatcgagagctgctacttcctgcgctgtttcgacaatcaatgg
ttgctgcgttttcatctgcaggccgagtctgtcggcctgttcagtgaagggctgctggcg
tttgacggcgaagggcggatcagcgcagtcaaccagagtgcgctgaacctgctcgggcat
attcgcggcggtttgctcggtaaatcggtggaagcgtttttcgattgttcgctggatgac
ctgcttggtcgcgcgagtgccaacgccagcgccagttggccgctgcgcacccgtgatggc
cggcatctgtttgccgtgttgcgcggtgaatcgcgcaaacctactgccattgttccaacg
ccaatcactgctccagcgccccgcctgtccggcatttgcctcggcgacgaagcgttgcag
gcggagtttcgcaaagccctgcgcgtgttcgagcgcgacgtgccgctgttgatcaacggc
gaaaccggctcgggcaaggaggcgtttgccaaggcagtgcatcaggccagccagcgctgc
ggcaacgcttttgtcgcactcaattgcgcggccattccggaaagcctgatcgagagcgaa
ctgttcggctatcgcggcggcagcttcaccggcgcacgcaaggacggcatgcgcggcaag
ctgcaacaggccgatggcggcactttgttcctcgacgaaatcggcgacatgccactggcg
ttgcagacgcgcttgctgcgggtgctggaagatcggcaagtggtgccgattggcggtgaa
ccgcaagcggtggacgtgcgcatcatcagtgcgacgcaccgcaatttgctcgaacgagtc
gaggacggcagtttccgtgaagacctgtattaccgcttgaacgggctggaagtggcgttg
ccggcattgcgtgagcgcagtgataaatcgcagttgctggactttctcctggccgaggag
gccggaggcgaaacgattctgatcgacgaagcggcgcggcaggcgttgctggcgttcgat
tggccgggcaatgtgcggcagttgcgcaatgtcctgcgtacgctggcggcgttgtgtgat
ggcgggcgggtcggggttgaggatttgccggtgatgattcggcaggcgcggccggcggtg
gtggcgcagccattggaagatgccgaacgactggccttgctcagtgcgctggagcagacg
cgctggcatatgacccgtaccgctgaacagttgggcgtcagccgcaatacgctgtacaga
aagcttcgcaagcacggtattgcccgctctgcctga
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