Pseudomonas koreensis: AYO71_27820
Help
Entry
AYO71_27820 CDS
T04647
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pkr
Pseudomonas koreensis
Pathway
pkr03030
DNA replication
pkr03430
Mismatch repair
pkr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AYO71_27820
03430 Mismatch repair
AYO71_27820
03440 Homologous recombination
AYO71_27820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkr03032
]
AYO71_27820
03400 DNA repair and recombination proteins [BR:
pkr03400
]
AYO71_27820
Enzymes [BR:
pkr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AYO71_27820
DNA replication proteins [BR:
pkr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AYO71_27820
DNA repair and recombination proteins [BR:
pkr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AYO71_27820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AMT91177
LinkDB
All DBs
Position
6174154..6174861
Genome browser
AA seq
235 aa
AA seq
DB search
MSLFSWLRPSSPVVSADLQQRLANLPALAELSECSLREQRWVVLDLETTGLNMSKDRVLS
IGAVVIEDGAIDFRQQFERTLQCRELKLSPSVLIHGLGPNAIAAGSDPAEALLELLEFIG
DSPVLAFHAPFDQHMLGRAVKEHLGHKLQHVFLDVADIAPFLCPQAQIREAGLDEWIEWF
RLEVFERHNASADALATAELALILFSRARGQQILSPLQLQQRLSQWKRRQQTHSF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgttttcctggctgcgcccgtcaagtcccgtagtgtcggcggatctacagcag
cggctggcgaatctgccggcgcttgccgagctgagcgaatgcagcctgcgtgagcagcgc
tgggtggtgctggacctggaaaccaccggcctgaatatgagcaaggatcgggtcctgtcg
atcggcgcggtggtgattgaggacggcgcgatcgatttccgtcagcagttcgaacgcacc
ttgcaatgccgcgaattgaagctcagccccagcgtgctgattcatggcttgggaccgaat
gcgattgccgcaggcagcgacccggcggaagcgttgctggagttgctggagttcatcggc
gacagtccggtgctggcgtttcatgcgccgttcgatcagcacatgctcgggcgcgcagtg
aaagaacacctggggcataagctgcagcatgtgtttctggatgtggcagatatcgcgccg
tttctgtgtccgcaggcgcagattcgcgaggccgggctggatgagtggatcgagtggttc
cggctcgaagtgttcgagcggcataacgccagtgccgatgcgctggccacggcagaattg
gcattgattctgttcagccgcgcgcgggggcagcagattctcagtccgttgcagctgcag
cagcggttgagtcagtggaagcggcggcagcaaactcactctttctag
DBGET
integrated database retrieval system
