Pseudomonas koreensis: AYO71_27925
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Entry
AYO71_27925 CDS
T04647
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pkr
Pseudomonas koreensis
Pathway
pkr00260
Glycine, serine and threonine metabolism
pkr00460
Cyanoamino acid metabolism
pkr00630
Glyoxylate and dicarboxylate metabolism
pkr00670
One carbon pool by folate
pkr00680
Methane metabolism
pkr01100
Metabolic pathways
pkr01110
Biosynthesis of secondary metabolites
pkr01120
Microbial metabolism in diverse environments
pkr01200
Carbon metabolism
pkr01230
Biosynthesis of amino acids
pkr01240
Biosynthesis of cofactors
pkr04981
Folate transport and metabolism
Module
pkr_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pkr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AYO71_27925 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AYO71_27925 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AYO71_27925 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AYO71_27925 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AYO71_27925 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AYO71_27925 (glyA)
Enzymes [BR:
pkr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AYO71_27925 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AMT91198
LinkDB
All DBs
Position
complement(6195955..6197208)
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AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALIQPGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGINTDTGLIDYDEVERLAVECKPKMIVAGFSAYSK
TLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEALEPGFKAYQQQVIDNAQAMAS
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVSQCETLAGWICDILDNLGDADVEANVAQQVSALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagatccagggttacgacgatgcactgctggcggcgatgaat
gccgaggagcaacgtcaggaagatcacatcgagctgatcgcgtcggagaactacaccagc
aagcgcgtcatgcaggcgcaaggcagcggcctgaccaacaaatacgccgagggctatccg
ggcaagcgctactacggtggctgcgagcatgtggacaaggtcgaagcgctggccatcgaa
cgcgccaagcaactgttcggcgccgactacgccaacgtccagccgcactccggctcctcg
gccaacagcgccgtgtacctggcgctgatccagccgggtgacactatcctcggcatgagc
ctggcccacggcggtcacctgacccacggcgccaaagtgtcgtcctcgggcaagctctac
aacgctgtgcagtacggcatcaacaccgacaccggactgatcgactacgacgaagtcgag
cgtctggccgtcgagtgcaaaccgaaaatgatcgttgccggtttctccgcttactcgaag
actctggatttcccgcgcttccgccaaatcgccgacaaggtcggtgcgctgctgttcgtc
gacatggcccacgtcgccggtctggtcgctgccggcctgtacccgaacccgctgccgtac
gccgatgtggtcaccaccaccacgcacaaaaccctgcgcggtccgcgtggcgggctgatc
ctggccaagtccaacgaagagatcgagaaaaagctcaacgcggccgtttttcccggtgcc
cagggcggcccgctgatgcacgtcatcgccggtaaagcggtgtgcttcaaggaagcactg
gagcctggcttcaaggcttatcagcaacaagtgatcgacaacgcccaggcgatggccagc
gtgttcatcaagcgtggctacgatgtggtctccggcggcaccgacaaccatttgttcctg
gtcagcctgatccgtcagggcctgaccggcaaggacgccgacgccgcgctgggccgtgcc
cacatcaccgtgaacaagaacgccgtgccgaacgacccgcagtcgccgttcgtgacctcg
ggcctgcgcatcggcaccccggcggtgaccacgcgcggcttcaaggtcagccagtgcgaa
accctcgccggctggatctgcgacatcctcgacaacctcggcgacgccgatgtcgaggcc
aatgtcgcccagcaggtctcggccctgtgcgcagacttcccggtttatcgctga
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