Priestia koreensis: IE339_00025
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Entry
IE339_00025 CDS
T08027
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pks
Priestia koreensis
Brite
KEGG Orthology (KO) [BR:
pks00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pks03032
]
IE339_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:
pks03400
]
IE339_00025 (gyrB)
Enzymes [BR:
pks01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
IE339_00025 (gyrB)
DNA replication proteins [BR:
pks03032
]
Prokaryotic type
DNA Topoisomerases
IE339_00025 (gyrB)
DNA repair and recombination proteins [BR:
pks03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IE339_00025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UNL87083
LinkDB
All DBs
Position
4378..6300
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AA seq
640 aa
AA seq
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MEQKEVQQSYDADQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYC
SEIGVTIEKDNSITVTDDGRGIPVGMHEKMKRPAVEVIMTVLHAGGKFGGGGYKVSGGLH
GVGASVVNALSEFLEVFVHRDGKIHYQKYTRGVPNEDLKVIGDTDKTGTITHFKPDPEIF
KETLEYDYDTLANRIRELAFLNRNIKITITDKRQEPEKHKAYHYEGGIKSYVEHLNRSKE
PIHEEPIYIGGEKDGISIEVAMQYNEGYISNIYSFANNIHTYEGGTHESGFKTALTRVIN
DYARKNNLFKDSDANLTGEDVREGLTAIVSIKHPDPQFEGQTKTKLGNSEARTITDSLFS
DHLERFLLENPNVARKVVDKGTMASRARLAAKKARELTRRKSALEISSLPGKLADCASKD
PSISELYVVEGDSAGGSAKQGRDRHFQAILPLRGKIINVEKARLDKILSNNEVRSIITAL
GTGIGGDFDITKARYHKLVIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLY
KVSQGKRVEYAYNDKQLEEVLATLPATPKPSLQRYKGLGEMNPDQLWETTMDPTNRTLLQ
VSLKDAIEADETFEILMGDKVEPRRNFIEENAKYVKNLDI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaaagaagtacaacaatcatatgatgcagatcagatacaggtattagagggc
ttagaagcggtacgtaaacgtccaggtatgtatattggatctacaagcggaaaaggtctt
caccatttggtgtgggaaattgtagataacagtattgacgaagctttagctggttattgt
tcagaaatcggagtaaccatcgagaaggacaatagcattaccgtcactgatgatggtcgt
ggaattcctgtaggtatgcatgagaaaatgaaacgcccagctgtcgaagttattatgaca
gttcttcatgccggcggtaagttcggtggaggaggctataaagtttccggtggtctccat
ggtgtaggggcttctgttgttaatgccctgtcagaattcttagaagtgttcgttcaccgt
gatggaaaaatccattaccaaaaatatacgcgtggtgtcccaaatgaagatctaaaggtg
attggcgatacagacaaaacgggtacaattacacactttaagccagatccagaaatcttc
aaagagacgttagaatatgactatgacacgcttgcaaaccgaattcgtgaattagcgttc
ctaaatcgtaatattaaaatcacgattacagataaacgtcaagagccagaaaagcacaaa
gcttatcactatgagggtggaattaaatcctatgttgagcacttaaaccgctcaaaagaa
cctattcatgaagaacctatctatatcggtggagaaaaagatggaatctcgatcgaggta
gcgatgcagtataacgaaggatatattagcaacatctattctttcgctaacaacatccat
acttacgagggcggtacacatgaatctggattcaaaacggccttaacacgcgttatcaat
gattatgctcgaaagaataatctttttaaagatagcgatgcaaacttaactggtgaagat
gttcgagaaggtttaacagcaattgtctcaattaagcatcctgatcctcagtttgaggga
caaacaaaaacgaaattaggaaatagtgaagcgcgtacaatcactgactcgctattctct
gaccacttagagcgatttttacttgaaaacccgaacgttgctcgtaaagtagtagacaag
ggaacaatggcctctagagcccgtctagcagcgaaaaaagcgcgtgaacttactcgacgt
aaaagtgctttagaaatctctagtcttcctggaaaactagcagactgtgcttcaaaagat
ccttctattagtgaactatacgtagtagagggagattcagcgggtggatcagcaaagcaa
ggccgtgatcgccatttccaagctatcctcccattacgtggaaaaattatcaacgtggaa
aaggctcgtcttgataagattttatcaaacaacgaagttcgctctatcattacagcttta
ggaacagggattggtggagactttgatattacaaaggctcgttaccataaacttgtcatt
atgacagatgctgacgttgatggtgcgcacattcgtacgctgctattaacattcttctat
cgttatatgagacaaatcattgagcatggctatatctacattgcgcagccgcctttatat
aaggtttctcaaggtaaacgtgttgaatatgcgtacaacgataaacaactagaagaagta
ttagctaccttgccagctacaccgaaaccttctcttcaacgttacaaaggtctaggagaa
atgaatcccgaccaactttgggaaacaacaatggacccaacaaatcgtacattgcttcaa
gtaagcttaaaagatgcgattgaagcggacgaaacgtttgagatcttaatgggtgataag
gtagaaccgcgtagaaactttattgaagaaaacgctaaatacgttaaaaacctagatatc
taa
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