Priestia koreensis: IE339_00245
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Entry
IE339_00245 CDS
T08027
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pks
Priestia koreensis
Pathway
pks03030
DNA replication
pks03430
Mismatch repair
pks03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pks00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IE339_00245 (holB)
03430 Mismatch repair
IE339_00245 (holB)
03440 Homologous recombination
IE339_00245 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pks03032
]
IE339_00245 (holB)
03400 DNA repair and recombination proteins [BR:
pks03400
]
IE339_00245 (holB)
Enzymes [BR:
pks01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IE339_00245 (holB)
DNA replication proteins [BR:
pks03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IE339_00245 (holB)
DNA repair and recombination proteins [BR:
pks03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IE339_00245 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA_5
Motif
Other DBs
NCBI-ProteinID:
UNL85058
LinkDB
All DBs
Position
42184..43176
Genome browser
AA seq
330 aa
AA seq
DB search
MNKTWAQLEELQPQVLKILNNALVKDRVAHAYIFEGNRGTGKKEVSMLFAKSLLCQNNHG
VYPCNECINCKRIDSGNHPDMHVVEPDGNSIKKEQIQQLQSEFVKAGVESNRKIYVIEHV
DRMTVNAANSLLKFLEEPNSETYAILLTENPQKLLNTIISRCQVLSFRTLPPAHLQTRLI
NEGVDESSAIILSNLTNSMEEALQLNNDEWFGLGRKLVIQLYEVLMNRPHQALLFIHENW
VKHFTDKAQNEVGLNLLLLLYRDILHIQIDQEEKVVFSYKKEELKKDALQQSQKKTVRSL
ELILEAKNKLNSNMNLQLLMEQLVLDLQEG
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacgtgggcacagcttgaagaattacagccacaggttttaaagattttgaac
aatgcgttagtgaaagatagagttgcccacgcctacatattcgaaggtaatcggggaact
ggaaaaaaagaagtaagcatgttgtttgcgaagtcattgttatgtcaaaacaatcatggg
gtctatccatgtaacgaatgtattaattgcaagagaattgattctggcaaccaccctgat
atgcacgttgttgagcctgatggtaactcaattaaaaaagaacaaattcagcaattgcaa
agtgaatttgtgaaagctggggtagagtcgaaccgaaaaatttatgttattgagcatgta
gacagaatgacagtaaatgctgccaatagtttgctgaaatttttagaagaacccaacagt
gagacgtatgctattttattgacggaaaaccctcagaaattattaaataccattatttca
agatgtcaggtactatcatttagaactctccctcccgcacatttgcaaactcgcttaatt
aatgaaggcgtagatgaatctagtgctatcatactttcgaatttgacgaatagtatggaa
gaagcgttacaattaaataacgatgaatggtttggacttggaagaaagttagtgatacaa
ttatatgaagtactaatgaatagacctcaccaagctttattattcatccatgagaattgg
gtaaagcattttacagataaagcccaaaacgaggttggattaaatctattactcctttta
tatagagacatccttcatattcaaatagatcaggaagaaaaagtggtgttttcttacaag
aaagaagagcttaagaaagacgctcttcagcagagtcagaaaaaaaccgttcgatcttta
gaacttattttagaggccaaaaataaattaaactccaatatgaatttacaacttttaatg
gagcagctggtgttggatttgcaggagggataa
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