Priestia koreensis: IE339_00660
Help
Entry
IE339_00660 CDS
T08027
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pks
Priestia koreensis
Pathway
pks03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pks00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IE339_00660 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pks03021
]
IE339_00660 (rpoC)
03400 DNA repair and recombination proteins [BR:
pks03400
]
IE339_00660 (rpoC)
Enzymes [BR:
pks01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IE339_00660 (rpoC)
Transcription machinery [BR:
pks03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IE339_00660 (rpoC)
DNA repair and recombination proteins [BR:
pks03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IE339_00660 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Apocytochr_F_C
Peptidase_M23
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
UNL85127
LinkDB
All DBs
Position
125688..129281
Genome browser
AA seq
1197 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVTDTGDTPLEKKQLLSEKEYRAYLEKYGQTFHAAMGAEAVKKLLQ
DIDLEKEVDLLKEELKTAQGQRRTRAIKRLEVLEAFRNSGNDPAWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVSRGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREGSNGEGMIFKDTNEAILAYQNGYVHLHTRVAVD
AGSLNNETFTEEQNKQLLLTTVGKLIFNEILPKSFPYINEPTRLNLEVKTPEKYFVEKGA
DVREAIEKQPIIDPFKKKILGNIISEVFKRFKITETSKMLDRMKDLGFKHSTKAGITVGV
ADIVVLGEKEEILNEAQSKVDNVLKQFRRGLITEEERYERVISIWSAAKDTIQGKLMASL
DKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPSGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLLIRSLKEGTEEIEKLD
ERLVGRYARKAIKHPETGEVLVAENQMITEDLSEEVVDAGVEEVWIRSAFTCNTRHGVCK
KCYGRNLATGSQVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQAVITEVAGTVTNITEGRDRQHEITVQGEIETKTYNAPYSARLKVTEGQSVTR
GQVLTEGSIDPKELLKVRDMTAVQEYLLHEVQKVYRMQGVEIGDKHIEVMVRQMLRKVRV
TDAGDTEVLPGSLLDVHQFTDANQQVLLEGKQPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMTRYRLTEPVTSSTEEPVTID
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgttaataacttcgagtatatgaaaattggtcttgcttcacctgataagatc
cgttcttggtcttacggagaagttaagaaaccagaaactatcaactatcgtacgttaaaa
cctgaaaaagatggtttgttctgtgagcgtattttcggtccaactaaggactgggaatgc
cattgcggaaaatataaacgtgttcgttataaaggcgtagtttgtgaccgttgtggcgtt
gaagttacacgcgcaaaagttcgtcgtgaacgtatgggtcacatcgaactagctgcacct
gtatcacacatctggtatttcaaaggtatccctagccgcatgggacttgtcttagacatg
tcccctcgcgcgctagaagagatcatttacttcgcatcttacgtagtaacggatactggc
gatacaccacttgagaaaaaacaattgctttctgaaaaagaataccgtgcttatttagaa
aaatacggtcaaactttccatgctgcaatgggagcagaagcagttaaaaaacttttacaa
gatatcgatcttgaaaaagaagtagatcttcttaaagaagaactaaaaacagcacaaggc
caacgccgtacacgtgctatcaaacgtttagaagtattagaagcattccgtaactctgga
aatgatccagcatggatgattcttgatgtacttccggttattccaccagaattacgccca
atggtacagttagacggtggtcgttttgcgacttctgatttaaatgacttgtatcgtcgt
gtaatcaaccgtaacaaccgtttaaaacgtctacttgaccttggagcacctagcattatc
gttcaaaacgagaagcgtatgctacaagaagctgtagatgctttaattgataacggtcgt
cgtggtcgtcctgttacaggacctggtaaccgcccgttaaaatcactttctcatatgcta
aaaggtaagcaaggacgtttccgtcaaaacttactaggtaaacgtgttgactactctgga
cgttccgttatcgttgtaggaccgaacttaaagatgtaccaatgtggtttaccgaaagaa
atggcacttgagctattcaagcctttcgtaatgaaagaacttgtttctcgcggattagca
cacaacattaagagtgcgaaacgtaaaattgaacgcgtgcaaccagaagtttgggatgta
cttgagtctgttattaaggagcatccggttttacttaaccgtgcacctacgcttcacaga
cttggtattcaagcattcgaacctactctagtagaaggtcgtgcaattcgtcttcatcca
cttgtatgtactgcatacaacgccgattttgacggtgaccaaatggctgttcacgtacca
ctttcagcagaagcacaagcagaagcacgtattttaatgctagctgctcaaaatatctta
aaccctaaagatggtaaaccagttgtaactccgtctcaggatatggtattaggtaactat
tacttaactcttgaacgtgagggctctaacggtgaagggatgatcttcaaagatacaaac
gaagcaattttggcttatcaaaacggctacgttcaccttcatacgcgtgtagcagtagat
gcgggttctttaaataacgaaacgtttacagaagagcaaaacaagcaactactacttacg
actgttggtaaactgatctttaatgaaattttaccaaaatcattcccttatattaacgaa
cctacacgtttaaatcttgaggtgaaaacacctgagaagtatttcgtggaaaaaggtgca
gatgtaagagaagcgattgaaaaacaaccaatcattgatccattcaagaagaaaattctt
ggaaacattatttcggaagtatttaaacgtttcaaaatcactgaaacatctaaaatgctt
gaccgtatgaaggatctaggatttaaacattcaacaaaagctggtatcactgttggtgta
gctgacatcgtggtattaggtgaaaaagaagaaatcctaaacgaagctcagtctaaagtg
gacaatgtcctaaaacaatttagacgtggtctgatcacagaagaagaacgttacgagcgt
gtaatttctatctggagtgctgcgaaagatacgattcaaggcaaactgatggcaagctta
gacaaacgtaacccaatcttcatgatgagtgactctggtgcccgtggtaacgcatcaaac
tttacacagcttgctggtatgcgtggtttgatggccaacccatctggtcgtatcatcgag
ttaccgatcaaatcaagtttccgtgaaggtttaacagtattagaatactttatctctacg
catggtgcgcgtaaaggtcttgccgatacagctcttaaaacagccgattcaggttacctt
actcgccgtctagtagacgtagctcaagatgttatcatccgtgaagatgattgtggaaca
gaccgtggtttactgatccgttctttaaaagagggtacagaagaaatcgaaaaactagac
gaacgtttagttggccgttacgcaagaaaagcaatcaagcatcctgagactggtgaagta
cttgtagcagaaaaccaaatgatcacagaggatctttctgaagaagttgtggatgcaggt
gtcgaagaggtttggatccgctctgcctttacatgtaatacacgtcatggtgtatgtaaa
aaatgttatggtcgcaacttagctacaggatctcaagtagaagttggggaagcagtaggt
attattgccgctcaatctatcggggaacctggtacacagttaacaatgcgtacattccat
acaggtggggtagccggagacgatatcactcaaggtttaccacgtatccaagagctattt
gaagcacgtaatccaaaaggccaagcggttattactgaggtcgctggtacagtaacgaat
attactgaaggccgcgatcgtcaacacgaaattacagttcaaggtgaaattgaaacaaaa
acgtacaacgctccttacagtgctcgtctaaaagtaactgaaggtcagtctgttacacgt
ggtcaggtattaactgaaggttcaattgatccaaaagaattgcttaaagttcgtgatatg
acagctgttcaagaatatctcttacacgaagtacaaaaagtatatcgtatgcaaggggta
gaaattggtgataaacatatcgaagttatggtacgccaaatgcttcgtaaagtccgcgta
acagatgctggtgatactgaagtattacctggatcattactagacgttcaccaatttaca
gatgcgaaccaacaagtattgctagaaggaaaacaaccagctactggtcgtccagttctt
cttggtattacaaaagcatctcttgaaacagattccttcttatctgcagcatcattccaa
gaaacaactcgtgttcttacagatgcagcaattaaaggaaaacgcgatgaattacttgga
cttaaagaaaatgttatcattggtaagctagttccagctggtacgggtatgactcgttac
cgcttaacagagcctgtgacatcatctactgaagagccagtaacaatcgattaa
DBGET
integrated database retrieval system
