Priestia koreensis: IE339_09290
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Entry
IE339_09290 CDS
T08027
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pks
Priestia koreensis
Pathway
pks03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pks00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IE339_09290 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pks03019
]
IE339_09290 (recQ)
03400 DNA repair and recombination proteins [BR:
pks03400
]
IE339_09290 (recQ)
Enzymes [BR:
pks01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IE339_09290 (recQ)
Messenger RNA biogenesis [BR:
pks03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IE339_09290 (recQ)
DNA repair and recombination proteins [BR:
pks03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IE339_09290 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Sigma70_r4_2
GerE
HTH_7
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
UNL86659
LinkDB
All DBs
Position
1857233..1859365
Genome browser
AA seq
710 aa
AA seq
DB search
MMQEATRYLKSYFGYDQFRQGQEDIIQNVLNGHHTAGIMPTGGGKSLCYQIPALVLPGIT
LVISPLISLMKDQVDALEQVGIHATYINSTLTAGEADRRLEEVSMGECRILYIAPERLES
PFFMQQLENLPISLVAVDEAHCISQWGHDFRPSYLRIHRFVKELSSQPTVLALTATATPQ
VQEDICAQLSIPQESTFITGFERSNLSFNVVKGQDADDFLQQYLKKNPGESGIIYAATRK
DVDALYERLNKSGIETGRYHAGLNEKERSDQQERFLRDDVTIMVATNAFGMGIDKSNVRF
VIHYQLPKNMESYYQEAGRAGRDGLESECILLYSPQDVQVQRYLIDQSMNEEKKKQELQK
LHQMRDYCHTEGCLQAFILHYFGDHNATECGKCSNCTDDRDSVDVTKETQMVLSCMIRMG
QRFGKTLIAQVLTGSNNKKVIDMRFNQLPTYGIMKDKTAKEVSEFIDFLTSEQIIGISGG
QYPVLIVTENGKSVLQGTHPVMRKEQVEVVQVAVDDELFEKLRQLRKAIADEENVPPFVI
FSDQTLQDISRRLPLSKEELLMVKGIGEQKKERYGDRFLQVVEDYKREHPDREPIVEEVK
VKKKPKRSSSKEGSHLVTFEMYEQGQSIEEIAKSRDLSLVTVENHLLRAAEDGKSIEWET
FFTHEQEKQVEEAIREVGEGFLKPIKEALPSDISYFVIKAILAKRQLMNQ
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaagaagcaacgcgctatttaaaaagttatttcggatatgatcagtttcgacaa
ggacaagaggatattattcaaaatgtcttaaacggtcatcacacggcaggcatcatgccc
acaggaggcgggaaatcactttgctatcaaattcctgctctcgtccttccagggataacg
cttgtgatctcaccgcttatctctttaatgaaagaccaagtggacgctctcgagcaagta
gggattcatgcgacgtatattaatagtacgttaacggcaggtgaagcagatcggcgccta
gaggaagtgagcatgggagaatgtcgcattttgtatatcgcgcctgaacgattagagtca
ccttttttcatgcagcagcttgaaaacttacctatttcgcttgttgcagtagatgaagct
cactgtatatcccagtgggggcatgattttcgaccaagctacttgcgtattcatcgcttt
gtaaaagagctctcgtctcaaccgactgtgttagcattaaccgcaacggccactccacaa
gtacaggaagatatttgtgcgcagctgtcgattccacaagaatccacttttattaccgga
tttgaacgcagtaatttatcctttaacgttgtaaaaggtcaagatgcagatgattttcta
cagcagtaccttaaaaaaaatccaggagaatcgggcattatttacgcggccacacgaaaa
gacgtggatgcattatatgagcgattgaacaaaagtggcattgaaacagggcgttatcat
gctggattaaacgagaaggagcgttcagatcagcaggaacgtttcttacgagacgatgtg
acgattatggtcgcaacgaatgcattcggaatgggcattgataaaagtaacgtgcgcttt
gtcattcattatcagcttcctaaaaatatggagagctactaccaagaagcagggcgtgcg
gggcgagatggtttagaaagcgaatgtatattgttatattcgcctcaggacgtccaagta
cagcgctatttaattgatcaatccatgaacgaggaaaagaagaagcaggagctgcaaaag
cttcatcaaatgcgcgattattgtcatacagaaggctgcttgcaagcatttatccttcac
tattttggcgatcataacgcaacggaatgcggaaaatgtagcaactgcacagatgatcga
gactcagtggatgtgacaaaagaaacacaaatggtgctctcttgtatgattcgcatggga
cagcgatttggaaaaacgttgattgcgcaagtgttaacgggttccaacaacaagaaagtt
atcgatatgcgttttaatcagcttcctacgtacgggattatgaaggataaaacggctaaa
gaagttagtgaatttattgatttcctgacttctgaacagattattggcatttcgggagga
caatatcctgttttaatcgtcacggaaaatgggaagagcgtgcttcaagggacgcatcct
gtcatgcgaaaagaacaggtagaggtcgtgcaagtcgcggtcgatgacgagctctttgaa
aagctccgtcagcttcgtaaagcaattgcggatgaagagaacgtgcctccttttgtcatt
ttctcggatcaaacgcttcaagatatatcgcggagacttccgctctcaaaagaggagctg
ttgatggtaaaaggaatcggggaacaaaagaaagagcgctacggagatcgttttcttcaa
gtagtagaagactataagcgtgaacatcctgaccgcgagccgattgtagaggaagtgaaa
gtaaagaaaaaaccaaagcgatcaagttcaaaggaagggtcccatttagtcacgtttgag
atgtatgaacaaggacaatcaattgaagagattgccaaaagccgcgacctttcgcttgta
acagtcgaaaatcatttattgcgtgcggcagaagacggtaaaagcattgagtgggagacg
ttttttacacatgaacaagaaaaacaagtggaagaggccattcgtgaagtgggagaaggc
ttcctgaaaccaatcaaagaagctcttccgagtgacattagttattttgttattaaagct
attttggcaaaacgtcaattaatgaatcagtag
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