Priestia koreensis: IE339_16625
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Entry
IE339_16625 CDS
T08027
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
pks
Priestia koreensis
Pathway
pks02024
Quorum sensing
pks03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pks00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IE339_16625 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IE339_16625 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pks03019
]
IE339_16625 (hfq)
03036 Chromosome and associated proteins [BR:
pks03036
]
IE339_16625 (hfq)
Messenger RNA biogenesis [BR:
pks03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
IE339_16625 (hfq)
Chromosome and associated proteins [BR:
pks03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
IE339_16625 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
DUF5608
Motif
Other DBs
NCBI-ProteinID:
UNL83776
LinkDB
All DBs
Position
complement(3150902..3151126)
Genome browser
AA seq
74 aa
AA seq
DB search
MKQSINIQDQFLNQLRKDNVYVTVYLLNGFQLRGLVKGFDNFTVLVESEGKQQLIYKHAI
STFIPNKNVNVDLE
NT seq
225 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagtcgatcaacattcaagatcagtttttgaaccaacttcgtaaagataacgta
tacgtaacggtatacctactaaatggttttcaattaagaggcttagtaaaaggctttgat
aactttactgtattagttgaatcagaaggcaagcagcagcttatctacaagcatgcgatt
tcaacgttcatcccaaataagaacgtgaacgttgacttagaatag
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