Priestia koreensis: IE339_16955
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Entry
IE339_16955 CDS
T08027
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pks
Priestia koreensis
Pathway
pks03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pks00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IE339_16955 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pks03019
]
IE339_16955 (pnp)
03016 Transfer RNA biogenesis [BR:
pks03016
]
IE339_16955 (pnp)
Enzymes [BR:
pks01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
IE339_16955 (pnp)
Messenger RNA biogenesis [BR:
pks03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IE339_16955 (pnp)
Transfer RNA biogenesis [BR:
pks03016
]
Prokaryotic type
tRNA degradation factors
IE339_16955 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
ATP-grasp
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
UNL83838
LinkDB
All DBs
Position
complement(3223704..3225827)
Genome browser
AA seq
707 aa
AA seq
DB search
MEHNKQVFSIELAGRELVVEVGQLAKQANGAALIRYGDTAVLSTATASKEPKDVDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSERAILASRLIDRPIRPLFADGFRNEVQVVSVVMSV
DQNCSSEMAAMFGSSLALSISDIPFEGPIAGVTVGRIEGKFVINPTVEEMEKSDINLVVA
GTKDAINMVEAGAQEVPEEIMLEAIMFGHDEIKKLIAFQEEIVAAVGKEKVEVSLYDVDA
DLKARVTEMAEADMNRAVQVQEKHARENAISEVKSAIVAKFEEEEADATTLKQVNEILGK
LVKAEVRRLITEEKVRPDGRKIDEIRPLSSEVGLLSRTHGSGLFTRGQTQALSICTLGAL
GDVQILDGLGVEESKRFMHHYNFPSFSVGETRPMRGPGRREIGHGALGERALEPVIPSEK
DFPYTVRLVSEVLESNGSTSQASICASTLAMMDAGVPLKAPVAGIAMGLIKSGEYYSVLT
DIQGMEDHLGDMDFKVAGTSKGVTALQMDIKIDGLSREILEEALEQAKKGRMQILEHMMT
TINQPRTELSRYAPKILTMSINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTIFISS
IESEMNQKAKKIIEDLVREVEVGQMYLGKVKRIEKFGAFVELFSGKDGLVHISELAEERI
GKVEDVVSMGDELLVKVMEIDKQGRVNLSRKAILKEQREAEQKEQQQ
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggaacacaacaaacaagtgttctctatcgaattagctggtcgtgagctagttgtcgaa
gttgggcagttagcaaagcaagcgaacggcgctgctttaattcgttatggagatacagca
gtattaagtacggcaacagcttcaaaagagccaaaagatgtcgactttttcccattaaca
gttaactatgaagagcgtttatacgcagtaggtaaaattcctggaggattcatcaaacgt
gagggacgtccaagtgaacgcgcaattttagcgagtcgtttaattgaccgtccaattcgt
cctcttttcgcagatggtttccgtaatgaagtacaagtagtcagcgttgtaatgagcgta
gaccaaaactgttcttcagaaatggctgctatgttcggttcatcattagcactatctatt
tctgatattccattcgaaggaccaattgctggtgttacggttgggcgtattgaaggcaaa
tttgtcatcaatccaacagtagaagaaatggaaaagagcgatattaaccttgttgtagca
ggaacaaaagatgcaatcaacatggtagaagctggtgcacaagaagtaccagaagaaatc
atgcttgaagcgatcatgtttggacatgacgaaattaagaaactaatcgcgttccaagaa
gaaattgtggctgcggttggaaaagaaaaagtagaagtttcattatatgatgtggatgca
gatctaaaagctcgcgtaacggaaatggctgaagctgacatgaatcgtgcggttcaagtg
caagaaaagcatgcacgtgaaaatgcaatcagcgaagtgaaatctgcgatcgtagcgaag
ttcgaagaagaagaagcagatgctacaacgcttaaacaagtgaacgaaattttaggtaag
cttgtaaaagcagaagtacgtcgccttattacagaagaaaaagtacgtccagacggtcgt
aaaatcgacgaaatccgtccactttcttctgaagtcggtcttttatcacgtacacacgga
tctggtttattcacacgtggacaaactcaggccctaagcatttgtacactaggtgcgcta
ggcgatgtgcaaattcttgatggattaggtgtagaagagtcaaaacgcttcatgcatcat
tacaacttcccatccttcagcgttggtgaaacaagaccaatgagaggtccaggacgtcgt
gaaatcggtcacggtgcactaggagagcgcgctcttgagccagttattccttctgaaaaa
gacttcccttacacagtacgtcttgtatcagaagtacttgaatcgaacggttcgacttca
caagcaagtatctgtgcaagtacgcttgcaatgatggacgcaggtgtaccacttaaagca
ccggttgctggtatcgcaatgggtcttatcaaatctggtgaatactactctgtattaaca
gatattcaaggaatggaagatcaccttggagatatggactttaaagtagcaggtacatca
aaaggtgtaacggcactacaaatggatattaaaatcgacgggttatcacgtgagatttta
gaagaagcattagagcaagcgaaaaaaggccgtatgcaaattctagaacacatgatgaca
acgatcaaccaaccgcgtacagagctttcacgctacgcacctaagattctaacaatgtct
attaaccctgataaaattcgcgatgttattgggccaagcggtaagcaaatcaataaaatc
atcgaagaaacaggcgttaaaatcgatatcgagcaagatggtacaatcttcatctcttct
attgagagtgaaatgaaccaaaaagcgaagaaaatcatcgaagaccttgttcgtgaagta
gaagttggtcaaatgtacttaggaaaagtaaaacgcattgagaaattcggagctttcgtt
gaattattcagcggtaaagacggattagtacacatctcagaactagctgaagaacgtatc
ggcaaagtagaagatgttgtttcaatgggcgatgagcttcttgtaaaagtaatggaaatc
gacaaacaaggccgtgtaaacctatcacgcaaagcgattctaaaagaacagcgcgaagcg
gagcaaaaagaacaacaacaataa
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