Priestia koreensis: IE339_21925
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Entry
IE339_21925 CDS
T08027
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
pks
Priestia koreensis
Pathway
pks02020
Two-component system
pks02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pks00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IE339_21925 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
IE339_21925 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pks03021
]
IE339_21925 (rpoN)
Transcription machinery [BR:
pks03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IE339_21925 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_3
HTH_11
HTH_36
HTH_23
HTH_Crp_2
MarR
Xre-like-HTH
HTH_10
Death
YebG
Sigma70_r4
HTH_38
Phage_CII
MarR_2
LacI
HTH_IclR
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
UNL84726
LinkDB
All DBs
Position
complement(4176178..4177476)
Genome browser
AA seq
432 aa
AA seq
DB search
MEVGLFQTQSLRVVMSKELSQAISLLQYSYTEILTFLQEQAMQNPLMDFQELGSTSLKSD
RHSMKPSIEFDQLRDDYESLQEHLISQLHFLPISSEEELIITYLIYSLNEYGYLDEDIEH
VSEVLGKDREIVKSSLKTLQQLEPSGVGARNLSECLWIQLKRKKQETPLALQLLKDHFEA
FALKKWEKLSRELNVTTGDIQEINDQIIHLNPRPGLQYSNERHRYITPDFIVKKVADRYD
VHMNAETDFTIRLNQQYMNVLAESRSTEAKAYLEDKQRELQWIMKSLNTRKQTLQLIMEA
LLIEQEAFFSNGMAYMKPLTMKQLADKIGVHESTISRAIRNKYVETSFGTYEMNVFFNSR
VSEDGEASSSAQIKEAMQTLIANENRQKPLSDQQLTKLLKEAYNMSVSRRTVAKYRDELH
ILPSSQRKVYVC
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaggtttatttcaaacccaatcattgcgtgtagtgatgagcaaggagctttca
caggctatatcactgcttcaatattcatatacagagattctaacttttctacaagaacaa
gcaatgcaaaatccgctaatggattttcaagagcttggttcgacatctttaaaaagtgat
cgtcattcgatgaaaccgtccattgaatttgatcaattaagagatgactatgaatcgtta
caggagcatttaatttctcagcttcatttcctgcctatttcttctgaagaggagcttatt
attacataccttatttatagtttaaatgagtacggatatcttgatgaggatattgagcat
gtcagtgaggttctaggaaaagaccgagaaattgtcaaaagcagtcttaaaacgcttcag
cagttagagcctagtggagtcggagcgcgaaacttatctgaatgcttgtggattcaatta
aagagaaagaaacaggaaacgccgcttgcacttcagttgcttaaagaccactttgaggca
tttgcgctaaagaaatgggagaagcttagtcgagaactgaatgtgaccacgggagatatt
caagaaattaatgaccaaatcatccatttgaacccgcgacctggattacaatattcaaat
gaacgtcatcgttatattacgcctgactttatcgtgaaaaaagtagctgatcgctatgat
gttcacatgaacgctgaaacagattttacgattcgattaaatcaacagtatatgaacgta
ttagctgaaagcagaagcacggaagcgaaggcttatttagaagacaagcagcgggaattg
cagtggattatgaaaagcttaaatacgaggaagcaaacgcttcaacttattatggaggca
ctgttgatagagcaggaagccttcttctctaatggaatggcttatatgaaaccactgaca
atgaagcaacttgcggacaaaataggcgtccatgaatcaactatcagtagagcaatccgc
aataaatatgttgaaacatcttttgggacctatgaaatgaacgttttttttaatagtcga
gtatcagaagatggagaggcatcctcttctgcacagattaaagaggccatgcaaacgctt
attgcgaatgaaaatagacaaaagccgttatcagatcaacagcttaccaaactgctgaag
gaagcgtataacatgtcggtttctcgaagaacggtagcgaagtatcgcgatgagcttcat
attttaccgtcttcacagcggaaagtgtatgtttgttag
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