Paucibacter sp. KCTC 42545: AT984_00515
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Entry
AT984_00515 CDS
T04227
Name
(GenBank) hypothetical protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pkt
Paucibacter sp. KCTC 42545
Brite
KEGG Orthology (KO) [BR:
pkt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pkt03016
]
AT984_00515
Enzymes [BR:
pkt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
AT984_00515
Transfer RNA biogenesis [BR:
pkt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AT984_00515
Prokaryotic type
AT984_00515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ALT75925
UniProt:
A0A0U2T6W1
LinkDB
All DBs
Position
105544..106560
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AA seq
338 aa
AA seq
DB search
MTDAQYLTLPQWPNAYPASGASATLKLLNEDFVVTELPLQLPSGAGEHIWLDVEKNGANT
AFVAQQLADAVGVQEWDVGYAGLKDRYAITRQWFSIYLPKGETPDLTQLQHPEFKVLSQS
RHVKKLRPGDLQGNRFRIVLREVTGDRDAIEANLKAVASQGVPNYFGAQRFGHDGGNVEQ
GRAMLAREIRVRNPKKKGIYLSAVRSFVFNEVLALRIQQGLWGQTLPGDVMDEAGRPTGP
LWGRGRVITTDQAQALENGVAERNATLCDGMEHAGLDQQRRALVASPVDMSWEWPQADQL
VLTFSLLAGNYATSVLSEILRTTEPERHTDNNEPAAVE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcccagtacttgaccttgccgcagtggcccaacgcttatccggccagtggc
gccagcgccaccttgaaactcctcaacgaggatttcgtcgtgaccgagttgccgctgcag
ctgccctccggtgcgggtgagcacatctggctggacgtcgagaagaacggcgccaacact
gccttcgttgctcagcagctggccgatgccgttggcgtgcaggaatgggacgtgggctat
gccggcctcaaggaccgctacgccatcacccgtcagtggttcagcatctatttgcccaag
ggcgagacgccggacctgacccagcttcagcatccggaattcaaggtgctgagccagagc
cgccacgtgaaaaagctgcgccccggtgatttgcagggcaaccgcttccgcatcgtgctg
cgtgaggtgacgggggatcgcgacgcgatcgaggccaatctgaaagccgtggcgtcacag
ggcgtgcccaactacttcggcgctcagcgtttcggccatgacggcggcaacgtcgaacag
ggccgggccatgctggcgcgcgaaatccgcgtgcgcaacccgaagaagaagggcatctac
ctgtcggcggtgcgctccttcgtcttcaatgaagtgctggcgctgcgcattcagcagggg
ctctggggtcagaccttgcctggcgacgtgatggacgaggcgggccggcccaccggaccg
ctctggggacgaggccgcgtgatcaccaccgatcaagcgcaggctctggaaaacggcgtg
gctgaacgcaatgccaccttgtgcgacggcatggagcacgccggtctggatcagcagcgt
cgcgccctggtggcgagcccggtggacatgtcatgggaatggccgcaagccgatcagctg
gtgctcacgttttctttgctcgccgggaattacgccacctccgttctgagcgaaatcctc
cgcaccacggagcctgagcggcacaccgataacaacgagcccgccgctgtcgaatga
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