Paucibacter sp. KCTC 42545: AT984_03775
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Entry
AT984_03775 CDS
T04227
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pkt
Paucibacter sp. KCTC 42545
Pathway
pkt03410
Base excision repair
pkt03430
Mismatch repair
pkt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pkt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AT984_03775
03430 Mismatch repair
AT984_03775
03440 Homologous recombination
AT984_03775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkt03400
]
AT984_03775
DNA repair and recombination proteins [BR:
pkt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AT984_03775
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AT984_03775
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AT984_03775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ALT76455
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Position
complement(860410..862146)
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AA seq
578 aa
AA seq
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MAANAPQLLTREVPPRAAWALEQAGHTPLLARLFAARGVREPLELDDGLARLLPPESLLG
ASAAAQLLADAILAGERICLVADYDCDGATACVVALRGLALLGAKPEQLGYVVPDRAVHG
YGLTPAIVELALPQRPQVLMTVDNGIASIAGVAHAKALGLKVLVTDHHLPALIDGQIVLP
AADAIVNPNQPACSFESKNLAGVGVAFYVLLALRSELRRRGAFDAASQPKLDGLLDLVAL
GTVADVVKLDANNRRLVAQGLKRMRGGRVQPGVQALFTAAGRDCSRATGFDLGFALGPRI
NAAGRLSDMTLGIECLLSDEPSRALELAKQLDAINRERREIEADMKEQAEAKLDHIMSLL
DGEPPAALCLFEADFHEGVVGIIASRLKDRVHRPTFVFAQGADGQLKGSGRSIPGFHLRD
ALDLVSKRQPELLKKFGGHAMAAGCTLADPESFAAFNQALQTVAAEWLDAAALTRTLRTD
GPLSPEFFTPDTVRSLDAQVWGQAFEAPLFCDQVDVISQRIVGERHLKLRIRQAGVLRDA
IWFSHIDPVPESGRMAYRLSLDEYQGQQRVQMIVEALV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggccgctaacgccccgcaactgctgacccgtgaggtaccgccccgcgccgcctgggcc
ttggagcaagccggccacacgcccctgctggcgcgcctgtttgccgcccgtggcgtgcgt
gagccgctggaattggacgacggcctggctcgcctgctgccgcccgaatccctgctcggc
gccagcgccgcggcccagctcttggccgatgccatccttgctggcgagcgcatctgcctg
gtggccgactacgactgcgacggcgccaccgcctgcgtcgtcgccctgcgcggcctggct
ctgctgggcgccaagcccgagcaactcggctacgtcgtgcccgaccgcgccgtgcatggc
tacggactgacgcccgccatcgtcgagctggccctgccgcagcgcccgcaggtcttgatg
acggtggacaacggcatcgccagcatcgccggtgtggcccatgccaaggccttgggactg
aaggtgctggtgaccgaccaccatctgcccgccctcatcgacggccaaatcgtgctgccc
gcggccgacgccatcgtcaaccccaaccagcccgcctgcagcttcgagagcaagaacctg
gcgggcgtgggcgtggccttttacgtgctgctggccctgcgcagcgagctgcgccggcgc
ggcgcttttgacgccgccagccagcccaagctggacggcctgctggacctagtcgcactg
ggcacagtcgccgatgtggtcaaactcgacgccaataaccgccgcctggtcgcccaaggc
ctcaagcgcatgcgtggcggccgcgtgcagcccggcgtgcaagccctgttcacggcagcc
gggcgcgactgcagccgcgccaccggcttcgacctgggctttgccctggggccgcgcatc
aatgcggccgggcggttgtccgatatgacactcggcattgaatgcctgctcagcgatgag
cctagccgcgccttggaactcgccaaacagctcgacgccatcaaccgtgagcggcgtgag
attgaggccgatatgaaggagcaggccgaggccaagctggatcacatcatgagcttgctg
gacggcgaaccacccgccgccctttgtttgttcgaggccgactttcacgagggcgtggtg
ggcatcattgcctcgcgcctgaaggaccgcgtccatcgcccgacctttgtgttcgcacaa
ggcgccgatgggcagctcaagggctcggggcgctcgattccgggctttcatctgcgcgac
gcgctggacttggtcagcaaacgccagcccgagctgctgaagaaattcggcggccacgcc
atggcggccggctgtaccttggcggacccagaaagctttgctgctttcaaccaggccttg
caaaccgttgccgccgaatggctggacgcggccgccctgacccgcaccctgcgcaccgac
ggaccactctcgcccgagttcttcacgcccgacaccgtgcgcagcctggacgcgcaggtc
tggggccaggctttcgaggccccgctgttctgcgatcaggtggacgtgatttcgcagcgc
attgtgggtgagcgccacctcaagctgcgcattcgacaggccggcgtgctgcgcgacgcc
atctggttcagccatatcgacccagtgcccgagagcggccgcatggcctaccgcctgagc
ctggatgaataccagggccaacagcgggtgcagatgattgttgaggcgctggtctag
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