Paucibacter sp. KCTC 42545: AT984_04340
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Entry
AT984_04340 CDS
T04227
Name
(GenBank) integrase
Organism
pkt
Paucibacter sp. KCTC 42545
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
HTH_23
Sigma70_r4_2
HTH_3
HTH_28
HTH_26
HTH_29
HTH_31
KfrA_N
HTH_38
HTH_19
HTH_Tnp_ISL3
HTH_AsnC-type
Terminase_5
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ALT79624
UniProt:
A0A0U3F5U9
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Position
993549..995078
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AA seq
509 aa
AA seq
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MDMIGKIRRLHRRDKKSVREISRMTGLSRNTVAKWLNGPAPSASPKYSRAEQANKLTAFH
ETIRQALKADGHRPKHERRTGRALFAEIKAAGYEGSYSRLTDFIRDWRQGEGQAALVSAF
VPLTFELGEAFQFDWSEEGLVVGGIYYRMQVSHMKLCASRAFWLVAYPSQGHEMLFDAHT
RSFAALGGVARRGIYDNMKTAVDKVLKGKGRVVNERFGVMCAHYLFDPDFCNVASGWEKG
VVEKNVQDSLRRIWIDAAQQRFGSFTELNVWLAARCRALWEEVRHPVHEQFSLAEMLEHE
RLHLMPMPAAFDGYVEKSSRVSSTCLVTMARNRYSVPCEWAGQRVSVRLYPNHVVVVADD
AVVARHERLSDRGQTHYDWQHYVPLLERKPGALRNGAPFSDLPEPLQRLRRGLLREEGGD
RVMAKVLAIVPKAGLDTVLVAVELALEKLPPSGRVSVEHVVNVLSRLNEPSAPAPVDGVL
QVSKPVCSDTAQYDRLRDKLGSEEVHHEA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggacatgattggcaagatccggcgtttgcaccgccgagacaagaagtcggtgcgcgag
atttcgcgcatgactggcttgtcccgcaacacggtggcgaagtggctgaatggcccggcg
ccgtcggccagcccaaagtacagcagggctgagcaggccaataagctgacggctttccac
gagacgatcaggcaagccctgaaggctgacgggcatcgcccgaagcatgagcgtcgcacg
ggtcgagccttgttcgcagagatcaaggctgccggctacgagggcagctattcgcgcctc
accgacttcatccgcgattggcgtcagggcgaaggccaggcggcattggtgagtgccttt
gtaccgctgacgtttgagttgggcgaagccttccagttcgactggagcgaggaaggtttg
gttgtaggcggcatctattaccgcatgcaggtctcgcacatgaagctgtgcgccagccgg
gcgttctggctcgtggcctacccgagccaggggcacgagatgctattcgatgcccatacc
cgcagctttgcggccttgggcggcgtggccaggcgcggcatctacgacaacatgaagacg
gctgtggacaaggtcttgaagggcaagggccgggtcgtcaacgagcgcttcggggtgatg
tgcgcgcactacttgttcgaccccgacttctgcaatgtggcctcgggctgggagaaggga
gtcgtggagaagaatgtgcaggacagcctccggcgcatttggattgacgccgcccagcag
cgctttggctccttcaccgagctcaatgtctggttggcggcacgctgccgggcgctgtgg
gaggaggtccgacacccggtgcatgagcagttcagcttggccgagatgctggagcatgag
cgcctgcacctgatgccaatgcctgctgcgtttgatggctatgtcgagaagtcctccaga
gtgagcagtacctgcctggtgacgatggcgcgcaatcgctattcggtgccttgcgagtgg
gcaggccagagggtcagcgtcaggctgtatccgaatcatgtcgtggtggtggcggatgac
gccgtggtggcccggcacgaacgactgtcggaccgtgggcagacccactacgactggcag
cactatgtgccgctgctggagcgcaaacccggtgcattgagaaatggtgcgccgttcagc
gacctgcctgagccgctgcaaaggcttcgccggggcttgctgcgcgaggaaggcggtgac
cgcgtgatggcgaaggtgctggccatcgtgccgaaggcggggctggacaccgtcttggtg
gcggtcgaattggcactggagaagctgccgccgtcggggcgcgtcagcgtggaacatgtg
gtcaatgtgctgagccgcttgaatgagccgtcagcacccgcgcctgtggacggcgtgctg
caggtctccaaacctgtttgcagcgacaccgcgcagtacgaccgcctgcgtgacaagctc
ggcagcgaggaggtgcatcatgaagcgtga
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