Paucibacter sp. KCTC 42545: AT984_04885
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Entry
AT984_04885 CDS
T04227
Name
(GenBank) ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pkt
Paucibacter sp. KCTC 42545
Brite
KEGG Orthology (KO) [BR:
pkt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pkt03009
]
AT984_04885
Enzymes [BR:
pkt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AT984_04885
Ribosome biogenesis [BR:
pkt03009
]
Prokaryotic type
rRNA helicases
AT984_04885
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ALT76622
UniProt:
A0A0U2LPR9
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All DBs
Position
1106160..1107578
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AA seq
472 aa
AA seq
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MNASTDKLSFAQLPLSAAMQANLAQLGYNQMTPIQAASLPLALAGQDLIAQAQTGSGKTA
AFSLALLHKLDAARFDVQALVLCPTRELADQVTQEIRRLARAADNIKVLTLCGGSPMKPQ
MDSLGFGCHIAVGTPGRVMDHLERGSLNLAALNTLVLDEADRMLDMGFFDDIVTVAKQAP
KKRQTLLFSATYPEGIAKLSAQFMREPKEVKLNTAAVQAPTSIRQLAFEVTEAERLHAVS
LLLNHFRPASTIAFCNTKAQCRDLVEVLSGQGFVAMALHGDLEQRDRDQVLIQFANRSCS
VLVATDVAARGLDIAQLECVINVEVTPDMEVHTHRIGRTGRAGAEGLALSLASLDEMGRI
GRIEQMQGYPFVWQGLETLTPSAGGALQPPMDTLQILGGRKEKIRPGDILGALTGEAGFK
FEQVGKINITEFHSYVAVERSIAREAVKRLSDGKLKGRKVKVRRMADLVELS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcctccaccgacaaactctctttcgctcaacttcccttgagcgcggccatgcag
gccaacctagcgcagctgggctataaccagatgacgcctatccaggccgctagcctgccc
ttggctttggccggccaggatttgattgcccaggcgcaaaccggcagtggcaagaccgcc
gccttctcgctggcgctgctgcacaagctggacgccgcccgcttcgatgtgcaagccctg
gtgctgtgcccgacccgcgagttggcggaccaggtcacccaggagatccgtcgcctggcg
cgcgctgccgacaatatcaaggtgctgaccctgtgcggcggctcgccaatgaagccgcag
atggacagcctgggttttggctgccatatcgccgtgggcacacccggccgggtgatggac
catctggagcgcggcagcctgaatctggccgccttgaataccttggtgctggacgaagcc
gaccgcatgttggacatgggcttctttgacgacatcgtcaccgttgccaagcaagcaccc
aagaagcgccagaccttgctgttctctgccacctatccggaaggtattgccaagctgagc
gcgcagttcatgcgtgagcccaaggaggtcaagctgaacacggccgccgtgcaggcaccg
accagcattcgccaactggcgtttgaggtcaccgaggccgagcgtctgcacgctgtgtct
ttgctgctgaaccatttccgcccggccagcacgattgcgttttgcaataccaaggcgcag
tgccgtgatctggtcgaggtgctgagcggccagggctttgtggccatggccttgcatggc
gatttggagcagcgtgaccgcgaccaagtgctgatccagtttgccaaccgcagctgctcg
gtgctggtagcgaccgatgtggcggcgcgtggcctggacattgcccagctggagtgcgtg
atcaatgtcgaggtgacgcccgatatggaagtgcacacccaccgtatcggccgcaccggg
cgggctggcgctgaaggcctggcgctcagcctggccagcctggatgagatgggccgcatc
ggccgcatcgagcagatgcagggctatccctttgtctggcaagggcttgagacgctcacg
cccagcgctggtggtgctttgcagccgccgatggataccttgcagatcctcggtggccgt
aaggaaaagatccgccccggcgacatcctgggcgcgctgaccggtgaggcaggcttcaag
ttcgagcaggtcggcaagatcaatatcaccgaattccacagctatgtggcggtggagcgc
agcattgcccgcgaggcggtcaagcgcttgtcagacggcaagctcaagggccgcaaggtc
aaggtgcggcgcatggccgatctggtcgagctgagctga
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